RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 PAK2Q13177 524 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 TREML2Q5T2D2 321 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 ALS2CLQ60I27 953 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 SLFN12LQ6IEE8 588 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 PRRT2Q7Z6L0 340 aaPredicted RBP18.17■□□□□ 0.5
GAPDH-201ENST00000229239 METTL13Q8N6R0 699 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 ZSWIM2Q8NEG5 633 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 SAAL1Q96ER3 474 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 PKNOX2Q96KN3 472 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 MCOLN1Q9GZU1 580 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 PORCNQ9H237 461 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 RAB20Q9NX57 234 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 LCTP09848 1927 aa18.17■□□□□ 0.5
GAPDH-201ENST00000229239 ADGRA3Q8IWK6 1321 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 ZNF233A6NK53 670 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 TMCO5BA8MYB1 307 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 BTBD19C9JJ37 291 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 FKTNO75072 461 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 SLC25A27O95847 323 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 MYBL2P10244 700 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 CLDN10P78369 228 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 SP2Q02086 613 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 MTERF2Q49AM1 385 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 C11orf63Q6NUN7 778 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 CYFIP1Q7L576 1253 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 SPATC1LQ9H0A9 340 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 NRBP2Q9NSY0 501 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 SEPT11Q9NVA2 429 aaKnown RBP18.16■□□□□ 0.5
GAPDH-201ENST00000229239 BTBD7Q9P203 1132 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 MIF4GDA9UHW6 222 aaKnown RBP18.16■□□□□ 0.5
GAPDH-201ENST00000229239 CEP104O60308 925 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 BUB1BO60566 1050 aaPredicted RBP18.16■□□□□ 0.5
GAPDH-201ENST00000229239 CYP2C19P33261 490 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 LIG4P49917 911 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 SP4Q02446 784 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 GCNT1Q02742 428 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 TAF1CQ15572 869 aaPredicted RBP18.16■□□□□ 0.5
GAPDH-201ENST00000229239 FAM160B1Q5W0V3 765 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 CTU1Q7Z7A3 348 aaKnown RBP18.16■□□□□ 0.5
GAPDH-201ENST00000229239 EXOC8Q8IYI6 725 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 HELQQ8TDG4 1101 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 EPS8L1Q8TE68 723 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 AFAP1L1Q8TED9 768 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 SLC7A3Q8WY07 619 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 CCDC127Q96BQ5 260 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 BICD1Q96G01 975 aa18.16■□□□□ 0.5
GAPDH-201ENST00000229239 NOCTQ9UK39 431 aaKnown RBP18.16■□□□□ 0.5
GAPDH-201ENST00000229239 PTPRFP10586 1907 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 MTA2O94776 668 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 HEXIM1O94992 359 aaKnown RBP18.15■□□□□ 0.5
GAPDH-201ENST00000229239 LDHAP00338 332 aaKnown RBP18.15■□□□□ 0.5
GAPDH-201ENST00000229239 ATP4AP20648 1035 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 ARL2P36404 184 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 DNA2P51530 1060 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 GPC5P78333 572 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 IRX3P78415 501 aaPredicted RBP18.15■□□□□ 0.5
GAPDH-201ENST00000229239 CNTN2Q02246 1040 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 PSMD6Q15008 389 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 KCNV1Q6PIU1 500 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 TAS1R3Q7RTX0 852 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 RPUSD2Q8IZ73 545 aaKnown RBP18.15■□□□□ 0.5
GAPDH-201ENST00000229239 PPM1KQ8N3J5 372 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 DHX38Q92620 1227 aaKnown RBP18.15■□□□□ 0.5
GAPDH-201ENST00000229239 SEMA4DQ92854 862 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 KREMEN1Q96MU8 473 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 KRT12Q99456 494 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 THAP2Q9H0W7 228 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 CARD9Q9H257 536 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 SLITRK6Q9H5Y7 841 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 ZFYVE28Q9HCC9 887 aa18.15■□□□□ 0.5
GAPDH-201ENST00000229239 ZCCHC17Q9NP64 241 aaKnown RBP18.15■□□□□ 0.5
GAPDH-201ENST00000229239 FTLP02792 175 aaPredicted RBP18.14■□□□□ 0.49
GAPDH-201ENST00000229239 ABCB4P21439 1286 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 UBA1P22314 1058 aaKnown RBP18.14■□□□□ 0.49
GAPDH-201ENST00000229239 SOX10P56693 466 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 SLC7A5Q01650 507 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 CUL1Q13616 776 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 C15orf39Q6ZRI6 1047 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 SEPT14Q6ZU15 432 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 SV2AQ7L0J3 742 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 DEPTORQ8TB45 409 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 WHAMMQ8TF30 809 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 SLC20A1Q8WUM9 679 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 FAM167AQ96KS9 214 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 TMEM134Q9H6X4 195 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 OSGEPQ9NPF4 335 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.14■□□□□ 0.49
GAPDH-201ENST00000229239 ADAM21Q9UKJ8 722 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 GOLGA6BA6NDN3 693 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 OPA1O60313 960 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 FARP2O94887 1054 aaPredicted RBP18.14■□□□□ 0.49
GAPDH-201ENST00000229239 PRPF4BQ13523 1007 aaKnown RBP18.14■□□□□ 0.49
GAPDH-201ENST00000229239 SND1Q7KZF4 910 aaKnown RBP eCLIP18.14■□□□□ 0.491e-26■■■□□ 18.7
GAPDH-201ENST00000229239 DNAAF5Q86Y56 855 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 CCDC26Q8TAB7 109 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 PSPC1Q8WXF1 523 aaKnown RBP18.14■□□□□ 0.49
GAPDH-201ENST00000229239 CEP89Q96ST8 783 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 TAS2R14Q9NYV8 317 aa18.14■□□□□ 0.49
GAPDH-201ENST00000229239 NOC2LQ9Y3T9 749 aaKnown RBP18.14■□□□□ 0.49
GAPDH-201ENST00000229239 TELO2Q9Y4R8 837 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms