RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 TOPORSQ9NS56 1045 aaPredicted RBP16.43■□□□□ 0.22
PAF1-201ENST00000221265 AGO2Q9UKV8 859 aaKnown RBP16.43■□□□□ 0.22
PAF1-201ENST00000221265 PLAGL2Q9UPG8 496 aa16.43■□□□□ 0.22
PAF1-201ENST00000221265 THSD7BQ9C0I4 1608 aa16.43■□□□□ 0.22
PAF1-201ENST00000221265 CTAGE15A4D2H0 777 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 ZNF263O14978 683 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 MAPK13O15264 365 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 SEPT4O43236 478 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 PLEKP08567 350 aaPredicted RBP16.42■□□□□ 0.22
PAF1-201ENST00000221265 CTAGE8P0CG41 777 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 HARSP12081 509 aaKnown RBP16.42■□□□□ 0.22
PAF1-201ENST00000221265 CYP27A1Q02318 531 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 TMEM62Q0P6H9 643 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 TFDP1Q14186 410 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 BRD3Q15059 726 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 MAPK6Q16659 721 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 GNASQ5JWF2 1037 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 NFRKBQ6P4R8 1299 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 GJB7Q6PEY0 223 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 CRELD2Q6UXH1 353 aaPredicted RBP16.42■□□□□ 0.22
PAF1-201ENST00000221265 GBP6Q6ZN66 633 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 RRAGAQ7L523 313 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 CTAGE6Q86UF2 777 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 CDR2LQ86X02 465 aaPredicted RBP16.42■□□□□ 0.22
PAF1-201ENST00000221265 CTAGE4Q8IX94 777 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 ACO2Q99798 780 aaKnown RBP16.42■□□□□ 0.22
PAF1-201ENST00000221265 FAM49AQ9H0Q0 323 aaPredicted RBP16.42■□□□□ 0.22
PAF1-201ENST00000221265 AJAP1Q9UKB5 411 aaPredicted RBP16.42■□□□□ 0.22
PAF1-201ENST00000221265 A0A0B4J269 797 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 CCDC151A5D8V7 595 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 LRRC53A6NM62 1247 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 ENC1O14682 589 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 ASAP2O43150 1006 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 KRT86O43790 486 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 SCP2P22307 547 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 MATR3P43243 847 aaKnown RBP eCLIP16.42■□□□□ 0.22
PAF1-201ENST00000221265 GJA9P57773 515 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 TUBB4BP68371 445 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 CYP24A1Q07973 514 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 TERF2Q15554 542 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 RUFY4Q6ZNE9 571 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 ZBTB33Q86T24 672 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 PARD3BQ8TEW8 1205 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 MFSD14AQ96MC6 490 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 PNKPQ96T60 521 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 MSTO1Q9BUK6 570 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 MRPL4Q9BYD3 311 aaKnown RBP16.42■□□□□ 0.22
PAF1-201ENST00000221265 C2orf40Q9H1Z8 148 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 FZD8Q9H461 694 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 ARHGAP20Q9P2F6 1191 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 HDAC6Q9UBN7 1215 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 TSKSQ9UJT2 592 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 RAB21Q9UL25 225 aa16.42■□□□□ 0.22
PAF1-201ENST00000221265 NRCAMQ92823 1304 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 LRRIQ3A6PVS8 624 aaPredicted RBP16.41■□□□□ 0.22
PAF1-201ENST00000221265 EXTL3O43909 919 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 ATP1A1P05023 1023 aaKnown RBP16.41■□□□□ 0.22
PAF1-201ENST00000221265 TMOD1P28289 359 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 MYL7Q01449 175 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 KLHDC7AQ5VTJ3 777 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 PAPD7Q5XG87 772 aaKnown RBP16.41■□□□□ 0.22
PAF1-201ENST00000221265 CXCL17Q6UXB2 119 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 CACNA2D4Q7Z3S7 1137 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 CCDC42Q96M95 316 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 FUT8Q9BYC5 575 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 UBXN6Q9BZV1 441 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 CEP72Q9P209 647 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 DUSP10Q9Y6W6 482 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 GTPBP10A4D1E9 387 aaKnown RBP16.41■□□□□ 0.22
PAF1-201ENST00000221265 RRN3P2A6NIE6 340 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 ABLIM1O14639 778 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 IPO7O95373 1038 aaKnown RBP16.41■□□□□ 0.22
PAF1-201ENST00000221265 ADAM17P78536 824 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 ZPBP2Q6X784 338 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 ZNF296Q8WUU4 475 aaPredicted RBP16.41■□□□□ 0.22
PAF1-201ENST00000221265 PLCB1Q9NQ66 1216 aa16.41■□□□□ 0.22
PAF1-201ENST00000221265 MBLAC1A4D2B0 266 aaPredicted RBP16.4■□□□□ 0.22
PAF1-201ENST00000221265 ACKR2O00590 384 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 CLDN3O15551 220 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 TREHO43280 583 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 MYCNP04198 464 aaPredicted RBP16.4■□□□□ 0.22
PAF1-201ENST00000221265 DLATP10515 647 aaKnown RBP16.4■□□□□ 0.22
PAF1-201ENST00000221265 RARBP10826 455 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 UCHL3P15374 230 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 ANK1P16157 1881 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 PHKA2P46019 1235 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 GPC3P51654 580 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 VAV2P52735 878 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 MCCD1P59942 119 aaPredicted RBP16.4■□□□□ 0.22
PAF1-201ENST00000221265 AMHR2Q16671 573 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 LONRF2Q1L5Z9 754 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 KIZQ2M2Z5 673 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 EEF1DP3Q658K8 133 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 LMBRD2Q68DH5 695 aaPredicted RBP16.4■□□□□ 0.22
PAF1-201ENST00000221265 SLFN12LQ6IEE8 588 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 PDXDC1Q6P996 788 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 NOA1Q8NC60 698 aaKnown RBP16.4■□□□□ 0.22
PAF1-201ENST00000221265 EHBP1Q8NDI1 1231 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 LMO3Q8TAP4 145 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 NLRP7Q8WX94 980 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms