RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 SNCAIPQ9Y6H5 919 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 MAPK13O15264 365 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 ATP9AO75110 1047 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 TACC1O75410 805 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 KCNA2P16389 499 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 CALRP27797 417 aaKnown RBP11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 GNA15P30679 374 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 MAN1A1P33908 653 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 PRKCIP41743 596 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 MAGEA1P43355 309 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 UGCGQ16739 394 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 C10orf76Q5T2E6 689 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 RNF10Q8N5U6 811 aaKnown RBP11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 ASPSCR1Q9BZE9 553 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 EFR3BQ9Y2G0 817 aa11.49□□□□□ -0.57
APOBEC3D-201ENST00000216099 K7ENM7 598 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 UCHL3P15374 230 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 NCKAP1LP55160 1127 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 JAM2P57087 298 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 GTF2BQ00403 316 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 ORC1Q13415 861 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 TDRD12Q587J7 1177 aaKnown RBP11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 DCAF17Q5H9S7 520 aaPredicted RBP11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 TEX35Q5T0J7 233 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 TRAF7Q6Q0C0 670 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 MSANTD4Q8NCY6 345 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 RPGRIP1Q96KN7 1286 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 NELL2Q99435 816 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 POLD4Q9HCU8 107 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 FAM53CQ9NYF3 392 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 PCDHA10Q9Y5I2 948 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 SAR1BQ9Y6B6 198 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 ZNFX1Q9P2E3 1918 aaKnown RBP11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 CTAGE15A4D2H0 777 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 A6NCN8 305 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 NDUFB5O43674 189 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 CCDC172P0C7W6 258 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 CTAGE8P0CG41 777 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 PRLRP16471 622 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 SLC9A1P19634 815 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 CKAP4Q07065 602 aaKnown RBP11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 SLC18A3Q16572 532 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 CTAGE6Q86UF2 777 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 CTAGE4Q8IX94 777 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 SLAIN1Q8ND83 568 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 CCDC43Q96MW1 224 aaKnown RBP11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 A1CFQ9NQ94 594 aaKnown RBP11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 JRKLQ9Y4A0 524 aa11.48□□□□□ -0.57
APOBEC3D-201ENST00000216099 BTNL10A8MVZ5 291 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 BACH1O14867 736 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 ATP8B1O43520 1251 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 GFPT2O94808 682 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 AGR2O95994 175 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 ATP1A1P05023 1023 aaKnown RBP11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 TUBBP07437 444 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 MYL3P08590 195 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 VARSP26640 1264 aaKnown RBP11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 FMO5P49326 533 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 KLHL30Q0D2K2 578 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 TCERG1LQ5VWI1 586 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 OTUD6AQ7L8S5 288 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 IRF2BP2Q7Z5L9 587 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 SYCP3Q8IZU3 236 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 PHTF2Q8N3S3 785 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 DNERQ8NFT8 737 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 ATP6V0A1Q93050 837 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 ALS2CR12Q96Q35 445 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 C17orf75Q9HAS0 396 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 GCNT4Q9P109 453 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 TFR2Q9UP52 801 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 SCN4AP35499 1836 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 SPATA31C2B4DYI2 1134 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 PSAPP07602 524 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 ICAM3P32942 547 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 EIF1AXP47813 144 aaKnown RBP11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 VGLL4Q14135 290 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 GNPTABQ3T906 1256 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 CCDC89Q8N998 374 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 ANKRD42Q8N9B4 389 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 PARD3BQ8TEW8 1205 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 SPON1Q9HCB6 807 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 FBXO40Q9UH90 709 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 FZD1Q9UP38 647 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 FHOD1Q9Y613 1164 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 PFASO15067 1338 aa11.47□□□□□ -0.57
APOBEC3D-201ENST00000216099 P4HA2O15460 535 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 STBD1O95210 358 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 ACTN1P12814 892 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 RTP1P59025 263 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 GFPT1Q06210 699 aaPredicted RBP11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 BFSP1Q12934 665 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 XKR9Q5GH70 373 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 CCDC81Q6ZN84 652 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 LHFPL2Q6ZUX7 228 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 KSR1Q8IVT5 923 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 TTC13Q8NBP0 860 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 KIFAP3Q92845 792 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 SPAG5Q96R06 1193 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 MYCBPQ99417 103 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms