RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 ITGA8P53708 1063 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 GAD2Q05329 585 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 TAF11Q15544 211 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 SLC27A3Q5K4L6 730 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 C6orf118Q5T5N4 469 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 SCARA3Q6AZY7 606 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 ANO7Q6IWH7 933 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 RNF207Q6ZRF8 634 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 ARMC9Q7Z3E5 817 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 CERS5Q8N5B7 392 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 AGPAT1Q99943 283 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 SYT15Q9BQS2 421 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 WDR18Q9BV38 432 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 C10orf88Q9H8K7 445 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 PRKAG3Q9UGI9 489 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 VAV3Q9UKW4 847 aa6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 TTC7AQ9ULT0 858 aaPredicted RBP6.25□□□□□ -1.41
CEACAM1-201ENST00000161559 KDM3AQ9Y4C1 1321 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 CLGNO14967 610 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 SPOPO43791 374 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 CALUO43852 315 aaPredicted RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 TBCAO75347 108 aaKnown RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 CLSTN1O94985 981 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 TTLL1O95922 423 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 CFHP08603 1231 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 T-ENOLP0DO92 83 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 TAC1P20366 129 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 MYL7Q01449 175 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 GABPAQ06546 454 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 OVGP1Q12889 678 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 TMED2Q15363 201 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 ZNF568Q3ZCX4 644 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 RNF220Q5VTB9 566 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 TPTE2Q6XPS3 522 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 LONP2Q86WA8 852 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 COL23A1Q86Y22 540 aaPredicted RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 SLC13A5Q86YT5 568 aaPredicted RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 SHKBP1Q8TBC3 707 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 ACSF2Q96CM8 615 aaPredicted RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 NUP85Q9BW27 656 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 ANKRD2Q9GZV1 360 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 AGPAT3Q9NRZ7 376 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 INTUQ9ULD6 942 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 NAALADL1Q9UQQ1 740 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 RABGAP1Q9Y3P9 1069 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 ANKRD62A6NC57 917 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 PEX11AO75192 247 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 GSTA1P08263 222 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 RARGP13631 454 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 TCF4P15884 667 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 LMNB1P20700 586 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 IVDP26440 423 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 RPA1P27694 616 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 EFTUD2Q15029 972 aaKnown RBP eCLIP6.24□□□□□ -1.418e-9■■□□□ 13.1
CEACAM1-201ENST00000161559 CERKLQ49MI3 558 aaPredicted RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 ASPRV1Q53RT3 343 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 PLEKHG4Q58EX7 1191 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 C1orf220Q5T0J3 134 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 CRELD2Q6UXH1 353 aaPredicted RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 FAM13CQ8NE31 585 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 SEMA4DQ92854 862 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 KLF6Q99612 283 aaPredicted RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 PI4K2AQ9BTU6 479 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 KIFC3Q9BVG8 833 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 IGKV6D-41A0A0C4DH26 115 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 SUN1O94901 812 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 SLITRK3O94933 977 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 ALAS1P13196 640 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 EEF2P13639 858 aaKnown RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 STX2P32856 288 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 NOVP48745 357 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 CTCFP49711 727 aaPredicted RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 RAD23BP54727 409 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 SLC8A3P57103 927 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 IKQ13123 557 aaPredicted RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 RIPK1Q13546 671 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 DHX34Q14147 1143 aaKnown RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 SLC10A5Q5PT55 438 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 SYCP2LQ5T4T6 812 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 ARHGAP27Q6ZUM4 889 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 SIAH1Q8IUQ4 282 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 TBC1D22AQ8WUA7 517 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 CKAP2Q8WWK9 683 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 CRYGNQ8WXF5 182 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 ARHGEF1Q92888 912 aaKnown RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 CD101Q93033 1021 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 ZNF622Q969S3 477 aaKnown RBP eCLIP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 KREMEN1Q96MU8 473 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 RPS6KC1Q96S38 1066 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 LRRC27Q9C0I9 530 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 CCDC134Q9H6E4 229 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 NINJ2Q9NZG7 142 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 PCYOX1Q9UHG3 505 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 ZBTB21Q9ULJ3 1066 aa6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 AHDC1Q5TGY3 1603 aaPredicted RBP6.24□□□□□ -1.41
CEACAM1-201ENST00000161559 USP34Q70CQ2 3546 aa6.23□□□□□ -1.41
CEACAM1-201ENST00000161559 A0A1W2PPM1 405 aa6.23□□□□□ -1.41
CEACAM1-201ENST00000161559 GOLGA8SH3BPF8 625 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms