RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 FUKQ8N0W3 1084 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 GOLPH3Q9H4A6 298 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 ANKZF1Q9H8Y5 726 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 NDE1Q9NXR1 346 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 UTP6Q9NYH9 597 aaKnown RBP12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 DMGDHQ9UI17 866 aaKnown RBP12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 CSADQ9Y600 493 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 SYNGAP1Q96PV0 1343 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 ZBBXA8MT70 800 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 MGEA5O60502 916 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 TSPY1Q01534 308 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 RSBN1LQ6PCB5 846 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 DAGLBQ8NCG7 672 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 TTC16Q8NEE8 873 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 RFFLQ8WZ73 363 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 CARD9Q9H257 536 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 JMJD4Q9H9V9 463 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 DCTN4Q9UJW0 460 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 IVNS1ABPQ9Y6Y0 642 aa12.9□□□□□ -0.34
TSPAN9-201ENST00000011898 ESYT2A0FGR8 921 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 ATP6V1G2O95670 118 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 BTKQ06187 659 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 RASSF3Q86WH2 238 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 SLC7A3Q8WY07 619 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 ANKS1AQ92625 1134 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 PPWD1Q96BP3 646 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 SYT17Q9BSW7 474 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 DIS3Q9Y2L1 958 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 CASZ1Q86V15 1759 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 GPR75-ASB3A0A0A6YYF3 556 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 SLC37A4O43826 429 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 POLR2BP30876 1174 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 LMNB2Q03252 620 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 Q4G0T1 1027 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 CASC4Q6P4E1 433 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 HHIPL2Q6UWX4 724 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 FAM160B2Q86V87 743 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 MMGT1Q8N4V1 131 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 PROCA1Q8NCQ7 364 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 PDZD8Q8NEN9 1154 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 TRIM11Q96F44 468 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 REEP2Q9BRK0 252 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 IFT122Q9HBG6 1241 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 SEL1LQ9UBV2 794 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 TACC3Q9Y6A5 838 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 SLX4Q8IY92 1834 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 IPO5O00410 1097 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 NDC80O14777 642 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 TMEM191BP0C7N4 346 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 ITIH3Q06033 890 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 EDRF1Q3B7T1 1238 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 C1orf146Q5VVC0 180 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 PAPD7Q5XG87 772 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 C3orf20Q8ND61 904 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 FAM81AQ8TBF8 368 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 NDEL1Q9GZM8 345 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 SLITRK6Q9H5Y7 841 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 CNOT8Q9UFF9 292 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 ANAPC7Q9UJX3 599 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 TCP11X1B4DZS4 312 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 GRIN3BO60391 1043 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 KRT75O95678 551 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 SMARCA1P28370 1054 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 MMP14P50281 582 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 GALCP54803 685 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 IGBP1P78318 339 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 GRB10Q13322 594 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 ALCAMQ13740 583 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 CENPPQ6IPU0 288 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 OLFML1Q6UWY5 402 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 SPATA17Q96L03 361 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 DRC3Q9H069 523 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 MRPL47Q9HD33 250 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 ZFP69BQ9UJL9 534 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 TRAF3IP3Q9Y228 551 aa12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.89□□□□□ -0.35
TSPAN9-201ENST00000011898 COL4A1P02462 1669 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 A0A087X0T9 212 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 LRRC10BA6NIK2 292 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 EYA4O95677 639 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 FAM228BP0C875 321 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 SOX5P35711 763 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 HERVK_113P62684 666 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 SCYL2Q6P3W7 929 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 SRRM1Q8IYB3 904 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 METTL13Q8N6R0 699 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 ATP2A3Q93084 1043 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 XPO6Q96QU8 1125 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 MTRQ99707 1265 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 TMA7Q9Y2S6 64 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 VEGFAP15692 232 aaPredicted RBP12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 DMPKQ09013 629 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 FIGNQ5HY92 759 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 ZBTB8OSQ8IWT0 167 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 AGBL3Q8NEM8 1001 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 ZCWPW1Q9H0M4 648 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 SEMA6BQ9H3T3 888 aa12.88□□□□□ -0.35
TSPAN9-201ENST00000011898 IRS2Q9Y4H2 1338 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms