RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 FAM120AQ6A0A9 1112 aaKnown RBP15.39■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Arrdc3Q7TPQ9 414 aa15.39■□□□□ 0.05
Ssr1-204ENSMUST00000225319 F13a1Q8BH61 732 aa15.39■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Ccdc142Q8CAI1 738 aa15.39■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Matr3Q8K310 846 aaKnown RBP15.39■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Nup58Q8R332 587 aa15.39■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Ccdc83Q9D4V3 305 aa15.39■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Prpf4Q9DAW6 521 aaKnown RBP15.39■□□□□ 0.05
Ssr1-204ENSMUST00000225319 PotegA5H0M4 473 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Ccdc152E9PX14 254 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Svs3aF2Z472 265 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Tff2Q03404 129 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Xkr4Q5GH67 647 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Pacsin1Q61644 441 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Sh3gl2Q62420 352 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Mbtd1Q6P5G3 631 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 NostrinQ6WKZ7 506 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Eif4bQ8BGD9 611 aaKnown RBP15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Grik4Q8BMF5 956 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Qsox1Q8BND5 748 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Pak2Q8CIN4 524 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 P3h4Q8K2B0 443 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Vps36Q91XD6 386 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Rtfdc1Q99K95 307 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Sppl3Q9CUS9 384 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Kdm8Q9CXT6 414 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Drap1Q9D6N5 205 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Lztfl1Q9JHQ5 299 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 H2-OaQ9QWV1 250 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Sept3Q9Z1S5 350 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Arid2E9Q7E2 1828 aa15.38■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Ttc13A0A1L1SSC7 844 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Skint7A7XV04 395 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Gm3138K7N754 218 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Zfp457L7N1X4 647 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Tlk2O55047 718 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Grm1P97772 1199 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Rapgef1Q3UHC1 1224 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Tax1bp1Q3UKC1 814 aaKnown RBP15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Krt15Q61414 452 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 FcgrtQ61559 365 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 KaznQ69ZS8 779 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Tlr11Q6R5P0 926 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Celf6Q7TN33 460 aaKnown RBP15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Suz12Q80U70 741 aaKnown RBP15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Micall1Q8BGT6 870 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Psmd5Q8BJY1 504 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Lin9Q8C735 542 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Il17cQ8K4C5 194 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Oit3Q8R4V5 546 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Sv2aQ9JIS5 742 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Fmnl1Q9JL26 1094 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Rnf103Q9R1W3 683 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Morc1Q9WVL5 950 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Scgb2b12S4R2L0 112 aa15.37■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Gm45261A0A1B0GSP6 197 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Osbpl7A2A716 963 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Gm10801F7C7Q0 168 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Kcnu1O54982 1121 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Rps6ka1P18653 724 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Tmod1P49813 359 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Hoxb13P70321 286 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Atp9bP98195 1146 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Nfe2Q07279 373 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Mgat3Q10470 538 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Lrriq3Q14DL3 633 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Muc3aQ3U5A2 218 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Hdhd2Q3UGR5 259 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Zfp90Q61967 636 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Spag7Q7TNE3 227 aaKnown RBP15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Slc51bQ80WK2 128 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Srrm3Q80WV7 648 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Ankfy1Q810B6 1169 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Ccser1Q8C0C4 895 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Ccdc87Q8CDL9 855 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Mtmr14Q8VEL2 648 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Olfr397Q8VEZ6 315 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 GldcQ91W43 1025 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Fubp1Q91WJ8 651 aaKnown RBP15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Tmco4Q91WU4 631 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 PpanQ91YU8 470 aaKnown RBP15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 CtsqQ91ZF4 343 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Atp6v0a4Q920R6 833 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Castor1Q9CWQ8 331 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Tbc1d15Q9CXF4 671 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Nxnl2Q9D531 156 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 SyncQ9EPM5 470 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Pold3Q9EQ28 462 aa15.36■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Cd44P15379 778 aa15.35■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Phka1P18826 1241 aa15.35■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Map2k1P31938 393 aa15.35■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Surf6P70279 355 aaKnown RBP15.35■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Srebf2Q3U1N2 1130 aa15.35■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Zfp957Q3UT76 567 aa15.35■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Klra7Q60654 280 aa15.35■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Ddx4Q61496 702 aa15.35■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Cd180Q62192 661 aa15.35■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Rnf139Q7TMV1 668 aa15.35■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Dzip3Q7TPV2 1204 aa15.35■□□□□ 0.05
Ssr1-204ENSMUST00000225319 Fgd5Q80UZ0 1219 aa15.35■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms