RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Stx1bP61264 288 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 E2f8Q58FA4 860 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 BcrQ6PAJ1 1270 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Fbxl13Q8CDU4 790 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 PdxkQ8K183 312 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Pcdha10Q91Y20 946 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Pdia6Q922R8 440 aaKnown RBP12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Kif19Q99PT9 997 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rhobtb3Q9CTN4 611 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gyg1Q9R062 333 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Bub1bQ9Z1S0 1052 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Veph1A1A535 833 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Wfs1P56695 890 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Atp6v1b2P62814 511 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rasgrf2P70392 1189 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Psd3Q2PFD7 1037 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Otud5Q3U2S4 566 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Foxred2Q3USW5 665 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Adrbk2Q3UYH7 688 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ddx3xQ62167 662 aaKnown RBP12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Sv2cQ69ZS6 727 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Atp6v0d2Q80SY3 350 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ttc16Q8C1F5 767 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 SucoQ8C341 1250 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Atxn7Q8R4I1 867 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 RpainQ9CWY9 219 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Nt5c3aQ9D020 331 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rassf7Q9DD19 359 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Arhgap26Q6ZQ82 814 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 ToporslQ9D2F8 683 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Serpina9Q9D7D2 418 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Scyl3Q9DBQ7 735 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Tlr9Q9EQU3 1032 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Cep152A2AUM9 1736 aaKnown RBP12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 1700024B05RikE9Q6D7 167 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Got1P05201 413 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Vps33bP59016 617 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Cdo1P60334 200 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rsad1Q5SUV1 442 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Papd7Q6PB75 542 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Arhgef19Q8BWA8 802 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Vmn1r191Q8K4D0 298 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Iqsec1Q8R0S2 961 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Tmem39aQ9CYC3 486 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 MymkQ9D1N4 221 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gstt4Q9D4P7 240 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Scgb2b20Q9JI02 112 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Dbn1Q9QXS6 706 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Abca6Q8K441 1624 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 CflarO35732 481 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Pou5f1P20263 352 aaKnown RBP12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Cops2P61202 443 aaKnown RBP12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Arl4aP61213 200 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Atp4aQ64436 1033 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Xlr3bQ6P205 226 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Daam1Q8BPM0 1077 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Klhl38Q8BSF5 581 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Olfr397Q8VEZ6 315 aa12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 NonoQ99K48 473 aaKnown RBP12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ahdc1Q6PAL7 1594 aaKnown RBP12.35□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gm10250G3X9L6 160 aaKnown RBP12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Cav1P49817 178 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Psmc1P62192 440 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rps6P62754 249 aaKnown RBP12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Trim43cP86449 446 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Mark2Q05512 776 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Wdr36Q3TAQ9 899 aaKnown RBP12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rrp36Q3UFY0 244 aaKnown RBP12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ccdc51Q3URS9 406 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Slitrk3Q810B9 980 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gga3Q8BMI3 718 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 4933409G03RikQ8C5U0 320 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Serpinb10Q8K1K6 397 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 4930550L24RikQ99PA7 320 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Tspan17Q9D7W4 270 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Atp5hQ9DCX2 161 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Cyp4f14Q9EP75 524 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Capn10Q9ESK3 666 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Dnajc7Q9QYI3 494 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Adamts13Q769J6 1426 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Map3k15A2AQW0 1331 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Apol8A2VDH7 339 aaKnown RBP12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Nccrp1G3X9C2 266 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ctnnal1O88327 731 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Myl2P51667 166 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rasip1Q3U0S6 961 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Tmem35bQ3U0Y2 150 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Map2k2Q63932 401 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 6820408C15RikQ8BJX2 354 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Trim47Q8C0E3 641 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Kbtbd13Q8C828 458 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Them5Q9CQJ0 248 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Cdr2lA2A6T1 465 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ccdc62E9PVD1 701 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Zfp212G3X8R7 492 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 TxnP10639 105 aaKnown RBP12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Drp2Q05AA6 957 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gsdmc4Q3TR54 480 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Samhd1Q60710 627 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rpf1Q7TND5 349 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms