RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 LipeP54310 759 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Fdxacb1Q3UY23 622 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 4933427I04RikQ3V053 235 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Zdhhc18Q5Y5T2 380 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Wnk4Q80UE6 1222 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Nipa1Q8BHK1 323 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Rsad2Q8CBB9 362 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Mrgprx1Q8CIP3 322 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Rell1Q8K2J7 272 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Lrrc14Q8VC16 493 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Q8VDP2 222 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Tom1l1Q923U0 474 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Sppl3Q9CUS9 384 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Stk11Q9WTK7 436 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Cntnap1O54991 1385 aa13.81□□□□□ -0.2
Nup88-203ENSMUST00000108531 Srsf11E9Q6E5 511 aaKnown RBP13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Prdm15E9Q8T2 1174 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Gm3182K7N6T8 263 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Alkbh1P0CB42 389 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Jdp2P97875 163 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Igsf9Q05BQ1 1179 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Tmem120bQ3TA38 339 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Sema5aQ62217 1077 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Klra3Q64329 266 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Klhl11Q8CE33 709 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 CalcbQ99MP3 130 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 YwhabQ9CQV8 246 aaKnown RBP13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 NkapQ9D0F4 415 aaKnown RBP13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 MesdQ9ERE7 224 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Znf704Q9ERQ3 566 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Rfwd2Q9R1A8 733 aaKnown RBP13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Gm15448F6PZL4 682 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Pitpnm1O35954 1243 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Itgb5O70309 798 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Art2aP17981 287 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 AdssP46664 456 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Slc8a1P70414 970 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Odr4Q4PJX1 447 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Insm1Q63ZV0 521 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Q8BGN9 141 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Kbtbd3Q8BHI4 607 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Vmn1r64Q8R2B8 320 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Kdm4bQ91VY5 1086 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Synpo2Q91YE8 1087 aaKnown RBP13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Olr1Q9EQ09 363 aa13.8□□□□□ -0.2
Nup88-203ENSMUST00000108531 Aff1O88573 1216 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 UgcgO88693 394 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Creb1Q01147 341 aaKnown RBP13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Fam198bQ3UPI1 517 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Oog4Q4G0C7 502 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Zswim5Q80TC6 1188 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Q99KU6 348 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Usp35M0QWN7 1009 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Mdm4O35618 489 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Atf2P16951 487 aaKnown RBP13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Oprl1P35377 367 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 NfibP97863 570 aaKnown RBP13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Smarcad1Q04692 1021 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 PrimpolQ6P1E7 537 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Gpr101Q80T62 511 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Agap1Q8BXK8 857 aaKnown RBP13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Tmem161bQ8C2L6 487 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Myef2Q8C854 591 aaKnown RBP13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 A430089I19RikQ8C9W1 407 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Snf8Q9CZ28 258 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Satl1Q9D5N8 744 aa13.79□□□□□ -0.2
Nup88-203ENSMUST00000108531 Myo5aQ99104 1853 aaKnown RBP13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Itgb4A2A863 1818 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 StrcQ8VIM6 1809 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Csf1rP09581 977 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Hmgb2P30681 210 aaKnown RBP13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 GssP51855 474 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Serpinb1cQ5SV42 375 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Tbc1d1Q60949 1255 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Zcwpw1Q6IR42 630 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Tmc8Q7TN58 722 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Tor4aQ8BH02 426 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Pkn2Q8BWW9 983 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Atp5c1Q91VR2 298 aaKnown RBP13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Themis2Q91YX0 663 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 IqcdQ9D3V1 458 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Pard6bQ9JK83 371 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 H2-OaQ9QWV1 250 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 JmyQ9QXM1 983 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Tjp3Q9QXY1 905 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Mettl1Q9Z120 268 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Znf394Q9Z1D9 521 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Mia3Q8BI84 1930 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Ly75Q60767 1723 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Spata31d1aE9QA35 1336 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Znf804aA2AKY4 1200 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 UrosP51163 265 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Rnf216P58283 853 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Pih1d3Q3KNI6 218 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Vars2Q3U2A8 1060 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Dab2ipQ3UHC7 1189 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 SkiQ60698 725 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Gbp4Q61107 620 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Tcf12Q61286 706 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Sp4Q62445 782 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 94.7 ms