RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Dcun1d2Q8BZJ7 259 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 OplahQ8K010 1288 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Rassf7Q9DD19 359 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Cyp2ab1S4R196 498 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Arhgap23Q69ZH9 1483 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Serpinb3cA2RSF9 386 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 TriqkB2B9E1 86 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Gm3187M0QWW3 260 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Exoc7O35250 697 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Aoc3O70423 765 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Prl2c3P04768 224 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ndufaf2Q59J78 168 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Pcdh18Q8VHR0 1134 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Hdac11Q91WA3 347 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 AslQ91YI0 464 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Gm5814J3QP80 125 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Sugp1Q8CH02 643 aaKnown RBP10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Q8CIL4 281 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Pkn3Q8K045 878 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ces1Q8VCC2 565 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Slc35c2Q8VCX2 364 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Usp29Q9ES63 869 aa10.81□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ube4aE9Q735 1028 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 R3hdm1E9Q9Q2 1135 aaKnown RBP10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Gucy1a2F8VQK3 730 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Unc5cO08747 931 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 PigrO70570 771 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Akap10O88845 662 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Trim72Q1XH17 477 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Togaram2Q3TYG6 1002 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Prl2c1Q5SVL9 228 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Caprin1Q60865 707 aaKnown RBP10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Krt32Q62168 407 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Pi16Q9ET66 489 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 PlekQ9JHK5 350 aaKnown RBP10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Usp14Q9JMA1 493 aaKnown RBP10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Pcsk1nQ9QXV0 258 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Sh2d3cQ9QZS8 854 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Top3bQ9Z321 862 aaKnown RBP10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Gm11985A0A1B0GS61 206 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Axin2O88566 840 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Syce1lQ5D525 247 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Lrrc8eQ66JT1 795 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Nlrp9bQ66X22 1003 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Rundc3bQ6PDC0 408 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Akap7Q7TN79 314 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Prpf18Q8BM39 342 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Man2a2Q8BRK9 1152 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Tigd4Q8BUZ3 513 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Galnt5Q8C102 930 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Bbs7Q8K2G4 715 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Gtf2a1lQ8R4I4 468 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Tmco1Q921L3 188 aaKnown RBP10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 MlklQ9D2Y4 472 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 PycardQ9EPB4 193 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Thap11Q9JJD0 305 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Uchl3Q9JKB1 230 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Rad51ap2G3UW63 976 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Gm3424L7N298 263 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Gm8246M0QWX9 263 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Rpl5P47962 297 aaKnown RBP10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Pon1P52430 355 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Atp6v1b2P62814 511 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Fam89aQ14BJ1 175 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Atp13a5Q3TYU2 1216 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Heatr9Q5QNV8 569 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 CcnyQ8BGU5 341 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Drd5Q8BLD9 478 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Slc44a2Q8BY89 706 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Rabl3Q9D4V7 236 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ttc37F8VPK0 1563 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Sdccag3A2AIW0 432 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ttll10A4Q9F3 704 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Zbed6D2EAC2 980 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Gm3264L7N2C5 238 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Mup5P11591 180 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Gsta3P30115 221 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Mark2Q05512 776 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ppp4r3cQ3V0Y1 813 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Krt73Q6NXH9 539 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Atp2b4Q6Q477 1205 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Otop3Q80UF9 577 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Zhx2Q8C0C0 836 aaKnown RBP10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ldlrap1Q8C142 308 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Alg3Q8K2A8 438 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Lztr1Q9CQ33 837 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Med7Q9CZB6 233 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Rab11fip1Q9D620 645 aa10.8□□□□□ -0.68
Lig4-201ENSMUST00000095476 Rps8P62242 208 aaKnown RBP10.79□□□□□ -0.68
Lig4-201ENSMUST00000095476 Pfdn4Q3UWL8 134 aa10.79□□□□□ -0.68
Lig4-201ENSMUST00000095476 Shc3Q61120 474 aa10.79□□□□□ -0.68
Lig4-201ENSMUST00000095476 Otud6aQ6IE21 290 aa10.79□□□□□ -0.68
Lig4-201ENSMUST00000095476 Ubxn7Q6P5G6 467 aa10.79□□□□□ -0.68
Lig4-201ENSMUST00000095476 Parp6Q6P6P7 630 aa10.79□□□□□ -0.68
Lig4-201ENSMUST00000095476 Best2Q8BGM5 508 aa10.79□□□□□ -0.68
Lig4-201ENSMUST00000095476 Dusp19Q8K4T5 220 aa10.79□□□□□ -0.68
Lig4-201ENSMUST00000095476 Klrb1fQ8VD98 217 aa10.79□□□□□ -0.68
Lig4-201ENSMUST00000095476 YarsQ91WQ3 528 aaKnown RBP10.79□□□□□ -0.68
Lig4-201ENSMUST00000095476 Tlr3Q99MB1 905 aa10.79□□□□□ -0.68
Lig4-201ENSMUST00000095476 Dbndd1Q9CZ00 160 aa10.79□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms