RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Tmco4Q91WU4 631 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 MesdQ9ERE7 224 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Spag17Q5S003 2320 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ncor1Q60974 2453 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Cdc27A2A6Q5 825 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Serpina16D3Z660 418 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Trim30bE9PVL6 203 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Card6E9PWH2 1175 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tmc3Q7TQ69 1130 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Bank1Q80VH0 783 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Sun2Q8BJS4 731 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Kcnv1Q8BZN2 503 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Hgh1Q8C3I8 393 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Reep2Q8VCD6 254 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ces1fQ91WU0 561 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ddx50Q99MJ9 734 aaKnown RBP7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Elf2Q9JHC9 593 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Morc1Q9WVL5 950 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Piezo1E2JF22 2547 aa7.43□□□□□ -1.22
Bdnf-201ENSMUST00000053317 1700016G14RikA0A286YCZ6 238 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Sema4dO09126 861 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Stx1aO35526 288 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Actn3O88990 900 aaKnown RBP7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Abcf1Q6P542 837 aaKnown RBP7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Pkn2Q8BWW9 983 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Agap1Q8BXK8 857 aaKnown RBP7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Leg1Q8C6C9 337 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Olfr30Q8VGD8 315 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Them5Q9CQJ0 248 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Rsrc1Q9DBU6 334 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Olig1Q9JKN5 260 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Znf394Q9Z1D9 521 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Acad12D3Z7X0 555 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 PtenO08586 403 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Eftud2O08810 971 aaKnown RBP7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 PtgisO35074 501 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ephb4P54761 987 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Bach2P97303 839 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Casp7P97864 303 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ripply1Q2WG77 201 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Carmil2Q3V3V9 1296 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Nxf2Q4ZGD8 691 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Atp13a4Q5XF90 1193 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ano5Q75UR0 904 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ano10Q8BH79 659 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Znf473Q8BI67 892 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Igdcc3Q8BQC3 813 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 KyQ8C8H8 661 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tcf25Q8R3L2 676 aaKnown RBP7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ebag9Q9D0V7 213 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Efhd1Q9D4J1 240 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tmem206Q9D771 350 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 R3hdm4Q4VBF2 262 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Rsad1Q5SUV1 442 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Xpnpep1Q6P1B1 623 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Metap1Q8BP48 386 aaKnown RBP7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Unc93b1Q8VCW4 598 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Rnf34Q99KR6 376 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Q9CYI0 393 aa7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 GarsQ9CZD3 729 aaKnown RBP7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Sf3a3Q9D554 501 aaKnown RBP7.42□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Lrrc38A2VDH3 298 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Trappc11B2RXC1 1133 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Abcb5B5X0E4 1255 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Olfr23Q7TRX4 325 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ctdp1Q7TSG2 960 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Kif2bQ8C0N1 668 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Prrg2Q8R182 198 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 CrygnQ8VHL5 183 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Hspbp1Q99P31 357 aaKnown RBP7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ndufab1Q9CR21 156 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Cox16Q9CR63 106 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Gucy1a3Q9ERL9 691 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ercc4Q9QZD4 917 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Supt3B0QZW4 406 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Gm8369E9PZI3 166 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 TnfP06804 235 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Gpr25P0C5I1 358 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Irf3P70671 419 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ppp1r12cQ3UMT1 782 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Zkscan4Q5SZT6 480 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Ift88Q61371 824 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 GartQ64737 1010 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 F13a1Q8BH61 732 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Slc9a7Q8BLV3 726 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Zdhhc14Q8BQQ1 489 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Clec1aQ8BWY2 269 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Eml3Q8VC03 897 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Tesk2Q8VCT9 570 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 PpanQ91YU8 470 aaKnown RBP7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Smc1aQ9CU62 1233 aaKnown RBP7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Serpinb12Q9D7P9 423 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 GatmQ9D964 423 aaKnown RBP7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Nkx2-4Q9EQM3 354 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Rab27aQ9ERI2 221 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Slc15a2Q9ES07 729 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Stk25Q9Z2W1 426 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Gm13084A2A8N0 494 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Zfp597E9Q6S0 419 aa7.41□□□□□ -1.22
Bdnf-201ENSMUST00000053317 Fgfr1P16092 822 aa7.41□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 141.8 ms