RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W URA8P38627 578 aaPredicted RBP3.47□□□□□ -1.85
ABP140YOR239W SRP68P38687 599 aaKnown RBP3.47□□□□□ -1.85
ABP140YOR239W ARP1P38696 384 aa3.47□□□□□ -1.85
ABP140YOR239W GPI16P38875 610 aa3.47□□□□□ -1.85
ABP140YOR239W RRG9P40156 214 aa3.47□□□□□ -1.85
ABP140YOR239W LRO1P40345 661 aa3.47□□□□□ -1.85
ABP140YOR239W MPM1P40364 252 aa3.47□□□□□ -1.85
ABP140YOR239W QRI7P43122 407 aa3.47□□□□□ -1.85
ABP140YOR239W HMS2P47175 358 aa3.47□□□□□ -1.85
ABP140YOR239W BUL1P48524 976 aa3.47□□□□□ -1.85
ABP140YOR239W EXG2P52911 562 aa3.47□□□□□ -1.85
ABP140YOR239W YGR079WP53249 370 aa3.47□□□□□ -1.85
ABP140YOR239W GTR2P53290 341 aa3.47□□□□□ -1.85
ABP140YOR239W YNL184CP53876 108 aa3.47□□□□□ -1.85
ABP140YOR239W DIA1P54005 336 aa3.47□□□□□ -1.85
ABP140YOR239W YML018CQ03730 393 aa3.47□□□□□ -1.85
ABP140YOR239W HPT1Q04178 221 aaKnown RBP3.47□□□□□ -1.85
ABP140YOR239W YMR087WQ04299 284 aa3.47□□□□□ -1.85
ABP140YOR239W AVO2Q04749 426 aa3.47□□□□□ -1.85
ABP140YOR239W YLR446WQ06204 433 aa3.47□□□□□ -1.85
ABP140YOR239W HEM25Q07534 307 aa3.47□□□□□ -1.85
ABP140YOR239W SRL2Q12020 392 aa3.47□□□□□ -1.85
ABP140YOR239W SLM3Q12093 417 aa3.47□□□□□ -1.85
ABP140YOR239W YOL114CQ12322 202 aa3.47□□□□□ -1.85
ABP140YOR239W YPL247CQ12523 523 aa3.47□□□□□ -1.85
ABP140YOR239W RPS4AP0CX35 261 aaKnown RBP3.46□□□□□ -1.86
ABP140YOR239W RPS4BP0CX36 261 aaKnown RBP3.46□□□□□ -1.86
ABP140YOR239W YFL068WP0CX99 160 aa3.46□□□□□ -1.86
ABP140YOR239W YLL066W-AP0CY00 160 aa3.46□□□□□ -1.86
ABP140YOR239W YLL067W-AP0CY01 160 aa3.46□□□□□ -1.86
ABP140YOR239W SAM2P19358 384 aaKnown RBP3.46□□□□□ -1.86
ABP140YOR239W DAL82P21705 255 aa3.46□□□□□ -1.86
ABP140YOR239W PRE8P23639 250 aa3.46□□□□□ -1.86
ABP140YOR239W STP22P25604 385 aa3.46□□□□□ -1.86
ABP140YOR239W MRP17P28778 131 aa3.46□□□□□ -1.86
ABP140YOR239W PRY2P36110 329 aa3.46□□□□□ -1.86
ABP140YOR239W ASC1P38011 319 aaKnown RBP3.46□□□□□ -1.86
ABP140YOR239W QDR3P38227 689 aa3.46□□□□□ -1.86
ABP140YOR239W HTD2P38790 280 aaKnown RBP3.46□□□□□ -1.86
ABP140YOR239W YHR122WP38829 231 aa3.46□□□□□ -1.86
ABP140YOR239W ARO9P38840 513 aaPredicted RBP3.46□□□□□ -1.86
ABP140YOR239W PRP39P39682 629 aaKnown RBP3.46□□□□□ -1.86
ABP140YOR239W HEM14P40012 539 aa3.46□□□□□ -1.86
ABP140YOR239W FIR1P40020 876 aa3.46□□□□□ -1.86
ABP140YOR239W COA1P40452 197 aa3.46□□□□□ -1.86
ABP140YOR239W YIL067CP40514 678 aa3.46□□□□□ -1.86
ABP140YOR239W EMC5P40540 141 aa3.46□□□□□ -1.86
ABP140YOR239W YGR035CP53222 116 aa3.46□□□□□ -1.86
ABP140YOR239W YVH1Q02256 364 aaKnown RBP3.46□□□□□ -1.86
ABP140YOR239W CTF19Q02732 369 aa3.46□□□□□ -1.86
ABP140YOR239W CGI121Q03705 181 aaKnown RBP3.46□□□□□ -1.86
ABP140YOR239W YDR415CQ04033 374 aaPredicted RBP3.46□□□□□ -1.86
ABP140YOR239W ERP1Q05359 219 aaKnown RBP3.46□□□□□ -1.86
ABP140YOR239W RRP45Q05636 305 aaKnown RBP3.46□□□□□ -1.86
ABP140YOR239W IPK1Q06667 281 aa3.46□□□□□ -1.86
ABP140YOR239W YLR036CQ07986 203 aa3.46□□□□□ -1.86
ABP140YOR239W BSC6Q08280 497 aa3.46□□□□□ -1.86
ABP140YOR239W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
ABP140YOR239W YLR049CQ12110 428 aa3.46□□□□□ -1.86
ABP140YOR239W PST1Q12355 444 aa3.46□□□□□ -1.86
ABP140YOR239W JLP1Q12358 412 aa3.46□□□□□ -1.86
ABP140YOR239W SRF1Q12516 437 aa3.46□□□□□ -1.86
ABP140YOR239W CYC7P00045 113 aa3.45□□□□□ -1.86
ABP140YOR239W ILV1P00927 576 aaKnown RBP3.45□□□□□ -1.86
ABP140YOR239W GDH1P07262 454 aaKnown RBP3.45□□□□□ -1.86
ABP140YOR239W RPS25BP0C0T4 108 aaKnown RBP3.45□□□□□ -1.86
ABP140YOR239W TFS1P14306 219 aa3.45□□□□□ -1.86
ABP140YOR239W ELO2P25358 347 aa3.45□□□□□ -1.86
ABP140YOR239W LOT5P34234 306 aa3.45□□□□□ -1.86
ABP140YOR239W PMU1P36069 295 aa3.45□□□□□ -1.86
ABP140YOR239W YHL044WP38727 235 aa3.45□□□□□ -1.86
ABP140YOR239W SFB3P38810 929 aa3.45□□□□□ -1.86
ABP140YOR239W YEL057CP39983 233 aa3.45□□□□□ -1.86
ABP140YOR239W ALK1P43633 760 aaKnown RBP3.45□□□□□ -1.86
ABP140YOR239W YHC3P47040 408 aa3.45□□□□□ -1.86
ABP140YOR239W MTO1P53070 669 aa3.45□□□□□ -1.86
ABP140YOR239W ASI3P53983 676 aa3.45□□□□□ -1.86
ABP140YOR239W YKR011CQ02209 353 aa3.45□□□□□ -1.86
ABP140YOR239W OAZ1Q02803 292 aa3.45□□□□□ -1.86
ABP140YOR239W HRD3Q05787 833 aa3.45□□□□□ -1.86
ABP140YOR239W NAT5Q08689 176 aa3.45□□□□□ -1.86
ABP140YOR239W ATG41Q12048 136 aa3.45□□□□□ -1.86
ABP140YOR239W YLR118CQ12354 227 aa3.45□□□□□ -1.86
ABP140YOR239W FRE6Q12473 712 aa3.45□□□□□ -1.86
ABP140YOR239W RPS25AQ3E792 108 aaPredicted RBP3.45□□□□□ -1.86
ABP140YOR239W YLR099W-AQ3E798 87 aa3.45□□□□□ -1.86
ABP140YOR239W ECM29P38737 1868 aa3.45□□□□□ -1.86
ABP140YOR239W SAL1D6W196 494 aa3.45□□□□□ -1.86
ABP140YOR239W HIS1P00498 297 aaKnown RBP3.45□□□□□ -1.86
ABP140YOR239W MSW1P04803 379 aa3.45□□□□□ -1.86
ABP140YOR239W ILV5P06168 395 aaKnown RBP3.45□□□□□ -1.86
ABP140YOR239W UBI4P0CG63 381 aaKnown RBP3.45□□□□□ -1.86
ABP140YOR239W SCH9P11792 824 aaKnown RBP3.45□□□□□ -1.86
ABP140YOR239W APE1P14904 514 aa3.45□□□□□ -1.86
ABP140YOR239W BUD5P25300 642 aaPredicted RBP3.45□□□□□ -1.86
ABP140YOR239W BOS1P25385 244 aa3.45□□□□□ -1.86
ABP140YOR239W PUT3P25502 979 aaPredicted RBP3.45□□□□□ -1.86
ABP140YOR239W YCL068CP25593 260 aa3.45□□□□□ -1.86
ABP140YOR239W GEX1P25596 615 aa3.45□□□□□ -1.86
ABP140YOR239W YCR099CP25657 155 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms