RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C HFA1P32874 2273 aa2.59□□□□□ -1.99
ATG3YNR007C RAS2P01120 322 aaKnown RBP2.58□□□□□ -2
ATG3YNR007C ILV5P06168 395 aaKnown RBP2.58□□□□□ -2
ATG3YNR007C YHR214C-DP0CX93 97 aa2.58□□□□□ -2
ATG3YNR007C ERD1P16151 362 aa2.58□□□□□ -2
ATG3YNR007C RPC19P28000 142 aaKnown RBP2.58□□□□□ -2
ATG3YNR007C NUP2P32499 720 aa2.58□□□□□ -2
ATG3YNR007C MAL32P38158 584 aa2.58□□□□□ -2
ATG3YNR007C FMP32P43557 207 aa2.58□□□□□ -2
ATG3YNR007C ECO1P43605 281 aa2.58□□□□□ -2
ATG3YNR007C STE24P47154 453 aa2.58□□□□□ -2
ATG3YNR007C TIS11P47977 285 aa2.58□□□□□ -2
ATG3YNR007C PAC10P48363 199 aa2.58□□□□□ -2
ATG3YNR007C YPT32P51996 222 aaKnown RBP2.58□□□□□ -2
ATG3YNR007C AIF1P52923 378 aa2.58□□□□□ -2
ATG3YNR007C YGR067CP53243 804 aa2.58□□□□□ -2
ATG3YNR007C YNL010WP53981 241 aaKnown RBP2.58□□□□□ -2
ATG3YNR007C SKI8Q02793 397 aaPredicted RBP2.58□□□□□ -2
ATG3YNR007C YMR102CQ03177 834 aa2.58□□□□□ -2
ATG3YNR007C YDR124WQ04608 324 aa2.58□□□□□ -2
ATG3YNR007C RRP9Q06506 573 aaKnown RBP2.58□□□□□ -2
ATG3YNR007C YLR413WQ06689 675 aa2.58□□□□□ -2
ATG3YNR007C SRL2Q12020 392 aa2.58□□□□□ -2
ATG3YNR007C NSL1Q12143 216 aa2.58□□□□□ -2
ATG3YNR007C MDM32Q12171 622 aa2.58□□□□□ -2
ATG3YNR007C TPT1Q12272 230 aaKnown RBP2.58□□□□□ -2
ATG3YNR007C PSF1Q12488 208 aa2.58□□□□□ -2
ATG3YNR007C YER078W-AQ3E7A2 54 aa2.58□□□□□ -2
ATG3YNR007C YPR096CO13587 100 aa2.57□□□□□ -2
ATG3YNR007C HHF1P02309 103 aaKnown RBP2.57□□□□□ -2
ATG3YNR007C PDE2P06776 526 aa2.57□□□□□ -2
ATG3YNR007C SSA3P09435 649 aaKnown RBP2.57□□□□□ -2
ATG3YNR007C ARO3P14843 370 aaKnown RBP2.57□□□□□ -2
ATG3YNR007C DAP2P18962 818 aa2.57□□□□□ -2
ATG3YNR007C PHO91P27514 894 aa2.57□□□□□ -2
ATG3YNR007C ARO2P28777 376 aaKnown RBP2.57□□□□□ -2
ATG3YNR007C ATP7P30902 174 aa2.57□□□□□ -2
ATG3YNR007C ZIP1P31111 875 aa2.57□□□□□ -2
ATG3YNR007C ASF2P32448 525 aaPredicted RBP2.57□□□□□ -2
ATG3YNR007C CYS4P32582 507 aaKnown RBP2.57□□□□□ -2
ATG3YNR007C NRP1P32770 719 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
ATG3YNR007C TOA1P32773 286 aa2.57□□□□□ -2
ATG3YNR007C CAT2P32796 670 aaKnown RBP2.57□□□□□ -2
ATG3YNR007C DTR1P38125 572 aa2.57□□□□□ -2
ATG3YNR007C FES1P38260 290 aa2.57□□□□□ -2
ATG3YNR007C OM14P38325 134 aa2.57□□□□□ -2
ATG3YNR007C APE4P38821 490 aa2.57□□□□□ -2
ATG3YNR007C FAD1P38913 306 aa2.57□□□□□ -2
ATG3YNR007C YMR144WP40214 342 aaKnown RBP2.57□□□□□ -2
ATG3YNR007C GAB1P41733 394 aa2.57□□□□□ -2
ATG3YNR007C SFH5P47008 294 aa2.57□□□□□ -2
ATG3YNR007C MRM2P53123 320 aa2.57□□□□□ -2
ATG3YNR007C RVB1Q03940 463 aaKnown RBP2.57□□□□□ -2
ATG3YNR007C YMR310CQ04867 317 aaPredicted RBP2.57□□□□□ -2
ATG3YNR007C BUR2Q05949 395 aa2.57□□□□□ -2
ATG3YNR007C ARR1Q06596 294 aa2.57□□□□□ -2
ATG3YNR007C YOR097CQ12274 175 aaPredicted RBP2.57□□□□□ -2
ATG3YNR007C SFM1Q12314 213 aa2.57□□□□□ -2
ATG3YNR007C SKS1Q12505 502 aa2.57□□□□□ -2
ATG3YNR007C CBP6P07253 162 aaPredicted RBP2.56□□□□□ -2
ATG3YNR007C ZWF1P11412 505 aaKnown RBP2.56□□□□□ -2
ATG3YNR007C KSS1P14681 368 aa2.56□□□□□ -2
ATG3YNR007C CDC10P25342 322 aaKnown RBP2.56□□□□□ -2
ATG3YNR007C MXR2P25566 168 aa2.56□□□□□ -2
ATG3YNR007C CSM1P25651 190 aa2.56□□□□□ -2
ATG3YNR007C ITR1P30605 584 aa2.56□□□□□ -2
ATG3YNR007C DEG1P31115 442 aaKnown RBP2.56□□□□□ -2
ATG3YNR007C YEF1P32622 495 aa2.56□□□□□ -2
ATG3YNR007C PAD1P33751 242 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
ATG3YNR007C YBL059WP34224 193 aa2.56□□□□□ -2
ATG3YNR007C ATP3P38077 311 aaKnown RBP2.56□□□□□ -2
ATG3YNR007C CHK1P38147 527 aa2.56□□□□□ -2
ATG3YNR007C PRS3P38689 320 aaKnown RBP2.56□□□□□ -2
ATG3YNR007C GRE3P38715 327 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
ATG3YNR007C COG3P40094 801 aa2.56□□□□□ -2
ATG3YNR007C LYS12P40495 371 aaKnown RBP2.56□□□□□ -2
ATG3YNR007C PHB1P40961 287 aa2.56□□□□□ -2
ATG3YNR007C OST1P41543 476 aaKnown RBP2.56□□□□□ -2
ATG3YNR007C KEL2P50090 882 aa2.56□□□□□ -2
ATG3YNR007C LSG1P53145 640 aaKnown RBP2.56□□□□□ -2
ATG3YNR007C MAL12P53341 584 aa2.56□□□□□ -2
ATG3YNR007C RHO5P53879 331 aaKnown RBP2.56□□□□□ -2
ATG3YNR007C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
ATG3YNR007C STD1Q02794 444 aa2.56□□□□□ -2
ATG3YNR007C SWP1Q02795 286 aa2.56□□□□□ -2
ATG3YNR007C YPL039WQ03080 316 aa2.56□□□□□ -2
ATG3YNR007C PRP3Q03338 469 aaPredicted RBP2.56□□□□□ -2
ATG3YNR007C YMR111CQ04461 462 aaPredicted RBP2.56□□□□□ -2
ATG3YNR007C HRI1Q05905 244 aaKnown RBP2.56□□□□□ -2
ATG3YNR007C NDE2Q07500 545 aa2.56□□□□□ -2
ATG3YNR007C SNX3Q08826 162 aaKnown RBP2.56□□□□□ -2
ATG3YNR007C ERV2Q12284 196 aa2.56□□□□□ -2
ATG3YNR007C PSY3Q12318 242 aa2.56□□□□□ -2
ATG3YNR007C RPL6BP05739 176 aaKnown RBP2.55□□□□□ -2
ATG3YNR007C FAS1P07149 2051 aaKnown RBP2.55□□□□□ -2
ATG3YNR007C DST1P07273 309 aa2.55□□□□□ -2
ATG3YNR007C CYR1P08678 2026 aaKnown RBP2.55□□□□□ -2
ATG3YNR007C PRB1P09232 635 aa2.55□□□□□ -2
ATG3YNR007C ARF1P11076 181 aaKnown RBP2.55□□□□□ -2
ATG3YNR007C GAL3P13045 520 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 126.9 ms