RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	PRP38	Q00723	242 aa	Predicted RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	SNX41	Q04053	625 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	INM2	Q05533	292 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	GMC2	Q06201	188 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	YOL019W	Q08157	551 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	GET4	Q12125	312 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	NCE102	Q12207	173 aa	RIP-Chip data	1.04	□□□□□ -2.24	not detected
CLU1	YMR012W	ADE4	P04046	510 aa	Known RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	YKR104W	P0CE69	306 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	EHD3	P28817	500 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	NDI1	P32340	513 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	SAC1	P32368	623 aa	Known RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	TCA17	P32613	152 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	TKL2	P33315	681 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	MTC4	P38335	694 aa	Known RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	HIS2	P38635	335 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	SEC72	P39742	193 aa	Known RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	SOK1	P40317	901 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	PAC11	P40960	533 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	YCH1	P42937	148 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	APT1	P49435	187 aa	Known RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	YGL117W	P53133	265 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	NSA1	P53136	463 aa	Predicted RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	YMR279C	Q03263	540 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	TDA1	Q03533	586 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	MRPL51	Q06090	140 aa	Predicted RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	YDR262W	Q12331	272 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	UTP23	Q12339	254 aa	Known RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	MED4	Q12343	284 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	YBL111C	Q3E7Y5	667 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	UBR1	P19812	1950 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	RPP2A	P05319	106 aa	Known RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	PEP5	P12868	1029 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	RPO26	P20435	155 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	RRT12	P25381	491 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	IMP1	P28627	190 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	ITR2	P30606	609 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	RAD24	P32641	659 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	PDC2	P32896	925 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	JEN1	P36035	616 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	BMT2	P38278	337 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	YGP1	P38616	354 aa	Known RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	YER184C	P39961	794 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	SHO1	P40073	367 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	LAS21	P40367	830 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	YPT32	P51996	222 aa	Known RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	CAF40	P53829	373 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	PGA2	P53903	129 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	GPI15	P53961	229 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	BET4	Q00618	327 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	ELP3	Q02908	557 aa	Known RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	YKL183C-A	Q3E765	70 aa		1.03	□□□□□ -2.24
CLU1	YMR012W	POL2	P21951	2222 aa	Known RBP	1.03	□□□□□ -2.24
CLU1	YMR012W	YBR056W-A	I2HB52	66 aa		1.03	□□□□□ -2.25
CLU1	YMR012W	THR4	P16120	514 aa	Known RBP	1.03	□□□□□ -2.25
CLU1	YMR012W	ACH1	P32316	526 aa		1.03	□□□□□ -2.25
CLU1	YMR012W	MRPL6	P32904	214 aa		1.03	□□□□□ -2.25
CLU1	YMR012W	YKL063C	P35725	167 aa		1.03	□□□□□ -2.25
CLU1	YMR012W	RRP3	P38712	501 aa	Known RBP	1.03	□□□□□ -2.25
CLU1	YMR012W	YIL024C	P40543	189 aa		1.03	□□□□□ -2.25
CLU1	YMR012W	MNN5	P46982	586 aa		1.03	□□□□□ -2.25
CLU1	YMR012W	MMT1	Q03218	510 aa		1.03	□□□□□ -2.25
CLU1	YMR012W	VPS60	Q03390	229 aa		1.03	□□□□□ -2.25
CLU1	YMR012W	INP1	Q03694	420 aa		1.03	□□□□□ -2.25
CLU1	YMR012W	ORM2	Q06144	216 aa		1.03	□□□□□ -2.25
CLU1	YMR012W	MSA1	Q08471	629 aa		1.03	□□□□□ -2.25
CLU1	YMR012W	YBR121C-A	P0C5L4	52 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	MEI4	P29467	408 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	MCH2	P36032	473 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	RPC37	P36121	282 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	FRM2	P37261	193 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	RCK1	P38622	512 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	RFC4	P40339	323 aa	Known RBP	1.02	□□□□□ -2.25
CLU1	YMR012W	UTP25	P40498	721 aa	Known RBP	1.02	□□□□□ -2.25
CLU1	YMR012W	STB1	P42845	420 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	SNZ3	P43545	298 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	BUL1	P48524	976 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	FMP48	P53233	369 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	MUM3	Q08750	479 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	YBR255C-A	Q3E776	120 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	HFA1	P32874	2273 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	COX2	P00410	251 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	TRP4	P07285	380 aa	Predicted RBP	1.02	□□□□□ -2.25
CLU1	YMR012W	OAR1	P35731	278 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	RIM2	P38127	377 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	LAG1	P38703	411 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	FLO9	P39712	1322 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	MRPL49	P40858	161 aa	Predicted RBP	1.02	□□□□□ -2.25
CLU1	YMR012W	CRZ1	P53968	678 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	CDC123	Q05791	360 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	THP3	Q12049	470 aa	Known RBP	1.02	□□□□□ -2.25
CLU1	YMR012W	RPL21B	Q12672	160 aa	Known RBP	1.02	□□□□□ -2.25
CLU1	YMR012W	ARF1	P11076	181 aa	Known RBP	1.02	□□□□□ -2.25
CLU1	YMR012W	YHR035W	P38769	630 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	SBE22	P38814	852 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	CCT4	P39078	528 aa	Known RBP	1.02	□□□□□ -2.25
CLU1	YMR012W	SEN34	P39707	275 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	FIS1	P40515	155 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	YIL029C	P40538	142 aa		1.02	□□□□□ -2.25
CLU1	YMR012W	YFR035C	P43608	114 aa		1.02	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms