RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W MRX4Q12467 430 aa1.49□□□□□ -2.17
SEC22YLR268W YOS9Q99220 542 aa1.49□□□□□ -2.17
SEC22YLR268W PAN1P32521 1480 aa1.49□□□□□ -2.17
SEC22YLR268W NUP157P40064 1391 aaKnown RBP1.48□□□□□ -2.17
SEC22YLR268W MET2P08465 486 aa1.48□□□□□ -2.17
SEC22YLR268W MET16P18408 261 aaPredicted RBP1.48□□□□□ -2.17
SEC22YLR268W ALK2P32789 676 aaPredicted RBP1.48□□□□□ -2.17
SEC22YLR268W RIB7P33312 244 aa1.48□□□□□ -2.17
SEC22YLR268W TRM7P38238 310 aaKnown RBP1.48□□□□□ -2.17
SEC22YLR268W YHI9P38765 294 aa1.48□□□□□ -2.17
SEC22YLR268W PET100P38958 111 aa1.48□□□□□ -2.17
SEC22YLR268W SHC1P39000 512 aa1.48□□□□□ -2.17
SEC22YLR268W COA1P40452 197 aa1.48□□□□□ -2.17
SEC22YLR268W KAP114P53067 1004 aa1.48□□□□□ -2.17
SEC22YLR268W ALG9P53868 555 aaKnown RBP1.48□□□□□ -2.17
SEC22YLR268W TVP15Q03860 143 aa1.48□□□□□ -2.17
SEC22YLR268W PRR2Q12310 699 aa1.48□□□□□ -2.17
SEC22YLR268W ATG5Q12380 294 aa1.48□□□□□ -2.17
SEC22YLR268W STH1P32597 1359 aa1.47□□□□□ -2.17
SEC22YLR268W RPL24AP04449 155 aaKnown RBP1.47□□□□□ -2.17
SEC22YLR268W ZWF1P11412 505 aaKnown RBP1.47□□□□□ -2.17
SEC22YLR268W POF1P25576 258 aa1.47□□□□□ -2.17
SEC22YLR268W UTR5P32630 166 aa1.47□□□□□ -2.17
SEC22YLR268W MRPL37P36532 105 aa1.47□□□□□ -2.17
SEC22YLR268W SDH4P37298 181 aa1.47□□□□□ -2.17
SEC22YLR268W ATG12P38316 186 aa1.47□□□□□ -2.17
SEC22YLR268W HSM3P38348 480 aa1.47□□□□□ -2.17
SEC22YLR268W NPT1P39683 429 aaKnown RBP1.47□□□□□ -2.17
SEC22YLR268W MEP1P40260 492 aa1.47□□□□□ -2.17
SEC22YLR268W SER33P40510 469 aa1.47□□□□□ -2.17
SEC22YLR268W TAD2P47058 250 aa1.47□□□□□ -2.17
SEC22YLR268W MIG2P53035 382 aa1.47□□□□□ -2.17
SEC22YLR268W YGL088WP53151 121 aa1.47□□□□□ -2.17
SEC22YLR268W TIM21P53220 239 aa1.47□□□□□ -2.17
SEC22YLR268W MPP6P53725 186 aaPredicted RBP1.47□□□□□ -2.17
SEC22YLR268W FMP41P53889 259 aaKnown RBP1.47□□□□□ -2.17
SEC22YLR268W CDC14Q00684 551 aa1.47□□□□□ -2.17
SEC22YLR268W SDC1Q03323 175 aa1.47□□□□□ -2.17
SEC22YLR268W LOA1Q06508 300 aa1.47□□□□□ -2.17
SEC22YLR268W CTR3Q06686 241 aa1.47□□□□□ -2.17
SEC22YLR268W FEX1Q08913 375 aa1.47□□□□□ -2.17
SEC22YLR268W FEX2Q08991 375 aa1.47□□□□□ -2.17
SEC22YLR268W YPL150WQ12152 901 aa1.47□□□□□ -2.17
SEC22YLR268W YEL009C-AA0A023PZF2 135 aa1.46□□□□□ -2.18
SEC22YLR268W TDH2P00358 332 aaKnown RBP1.46□□□□□ -2.18
SEC22YLR268W RSA4P25382 515 aaKnown RBP1.46□□□□□ -2.18
SEC22YLR268W MIG1P27705 504 aa1.46□□□□□ -2.18
SEC22YLR268W BMH1P29311 267 aaKnown RBP1.46□□□□□ -2.18
SEC22YLR268W CAB3P36076 571 aa1.46□□□□□ -2.18
SEC22YLR268W HEK2P38199 381 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18 RIP-Chip
SEC22YLR268W YGP1P38616 354 aaKnown RBP1.46□□□□□ -2.18
SEC22YLR268W SPL2P38839 148 aa1.46□□□□□ -2.18
SEC22YLR268W DDI1P40087 428 aa1.46□□□□□ -2.18
SEC22YLR268W MNT4P53745 580 aa1.46□□□□□ -2.18
SEC22YLR268W YNL095CP53932 642 aa1.46□□□□□ -2.18
SEC22YLR268W YPL039WQ03080 316 aa1.46□□□□□ -2.18
SEC22YLR268W COX20Q04935 205 aa1.46□□□□□ -2.18
SEC22YLR268W ARV1Q06541 321 aa1.46□□□□□ -2.18
SEC22YLR268W TIM22Q12328 207 aa1.46□□□□□ -2.18
SEC22YLR268W AI5_BETAQ9ZZX0 354 aa1.46□□□□□ -2.18
SEC22YLR268W HIS1P00498 297 aaKnown RBP1.45□□□□□ -2.18
SEC22YLR268W RPP0P05317 312 aaKnown RBP1.45□□□□□ -2.18
SEC22YLR268W RPL4AP10664 362 aaKnown RBP1.45□□□□□ -2.18
SEC22YLR268W KRE1P17260 313 aa1.45□□□□□ -2.18
SEC22YLR268W YKR032WP36127 104 aa1.45□□□□□ -2.18
SEC22YLR268W HMT1P38074 348 aa1.45□□□□□ -2.18
SEC22YLR268W ARN2P38724 620 aa1.45□□□□□ -2.18
SEC22YLR268W SUR2P38992 349 aa1.45□□□□□ -2.18
SEC22YLR268W YER084WP40057 128 aa1.45□□□□□ -2.18
SEC22YLR268W SCC4P40090 624 aa1.45□□□□□ -2.18
SEC22YLR268W RPL4BP49626 362 aaKnown RBP1.45□□□□□ -2.18
SEC22YLR268W NBP35P52920 328 aa1.45□□□□□ -2.18
SEC22YLR268W SLX9P53251 210 aaPredicted RBP1.45□□□□□ -2.18
SEC22YLR268W SYF2P53277 215 aaPredicted RBP1.45□□□□□ -2.18
SEC22YLR268W OST6Q03723 332 aa1.45□□□□□ -2.18
SEC22YLR268W SME1Q12330 94 aaPredicted RBP1.45□□□□□ -2.18
SEC22YLR268W RRP36Q12481 300 aaPredicted RBP1.45□□□□□ -2.18
SEC22YLR268W ISD11Q6Q560 94 aa1.45□□□□□ -2.18
SEC22YLR268W INO80P53115 1489 aa1.44□□□□□ -2.18
SEC22YLR268W COX2P00410 251 aa1.44□□□□□ -2.18
SEC22YLR268W HIS3P06633 220 aa1.44□□□□□ -2.18
SEC22YLR268W MRP1P10662 321 aaKnown RBP1.44□□□□□ -2.18
SEC22YLR268W RRT12P25381 491 aa1.44□□□□□ -2.18
SEC22YLR268W CSG2P35206 410 aa1.44□□□□□ -2.18
SEC22YLR268W YJL118WP47022 219 aa1.44□□□□□ -2.18
SEC22YLR268W YJR012CP47087 207 aa1.44□□□□□ -2.18
SEC22YLR268W OST3P48439 350 aa1.44□□□□□ -2.18
SEC22YLR268W SWS2P53937 143 aa1.44□□□□□ -2.18
SEC22YLR268W ALG11P53954 548 aaKnown RBP1.44□□□□□ -2.18
SEC22YLR268W YMR166CQ03829 368 aa1.44□□□□□ -2.18
SEC22YLR268W ADH6Q04894 360 aaKnown RBP1.44□□□□□ -2.18
SEC22YLR268W PEX10Q05568 337 aa1.44□□□□□ -2.18
SEC22YLR268W KAP95Q06142 861 aaKnown RBP1.44□□□□□ -2.18
SEC22YLR268W YOL019WQ08157 551 aa1.44□□□□□ -2.18
SEC22YLR268W CLP1Q08685 445 aaPredicted RBP1.44□□□□□ -2.18
SEC22YLR268W YHL049CP38722 271 aa1.43□□□□□ -2.18
SEC22YLR268W YAR1P46683 200 aa1.43□□□□□ -2.18
SEC22YLR268W NIF3P53081 288 aa1.43□□□□□ -2.18
SEC22YLR268W MAL13P53338 473 aa1.43□□□□□ -2.18
SEC22YLR268W AAH1P53909 347 aa1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms