RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W ACF2Q12168 779 aa4.05□□□□□ -1.76
CBF5YLR175W FLO9P39712 1322 aa4.05□□□□□ -1.76
CBF5YLR175W YEL009C-AA0A023PZF2 135 aa4.05□□□□□ -1.76
CBF5YLR175W OPI3P05375 206 aa4.05□□□□□ -1.76
CBF5YLR175W CDC31P06704 161 aaKnown RBP4.05□□□□□ -1.76
CBF5YLR175W PDE2P06776 526 aa4.05□□□□□ -1.76
CBF5YLR175W MRP1P10662 321 aaKnown RBP4.05□□□□□ -1.76
CBF5YLR175W RPA135P22138 1203 aaKnown RBP4.05□□□□□ -1.76
CBF5YLR175W EXG1P23776 448 aaKnown RBP4.05□□□□□ -1.76
CBF5YLR175W PUT3P25502 979 aaPredicted RBP4.05□□□□□ -1.76
CBF5YLR175W FUN26P31381 517 aa4.05□□□□□ -1.76
CBF5YLR175W MCM10P32354 571 aa4.05□□□□□ -1.76
CBF5YLR175W ZUO1P32527 433 aaKnown RBP4.05□□□□□ -1.76
CBF5YLR175W RSM22P36056 628 aa4.05□□□□□ -1.76
CBF5YLR175W SRP102P36057 244 aaPredicted RBP4.05□□□□□ -1.76
CBF5YLR175W FCY21P40039 528 aa4.05□□□□□ -1.76
CBF5YLR175W FMC1P40491 155 aa4.05□□□□□ -1.76
CBF5YLR175W NAS2P40555 220 aa4.05□□□□□ -1.76
CBF5YLR175W GPP1P41277 250 aaKnown RBP4.05□□□□□ -1.76
CBF5YLR175W MSY1P48527 492 aa4.05□□□□□ -1.76
CBF5YLR175W IMO32P53219 342 aa4.05□□□□□ -1.76
CBF5YLR175W SUR7P54003 302 aa4.05□□□□□ -1.76
CBF5YLR175W BNA7Q04066 261 aa4.05□□□□□ -1.76
CBF5YLR175W LUC7Q07508 261 aaPredicted RBP4.05□□□□□ -1.76
CBF5YLR175W MCH4Q08268 501 aa4.05□□□□□ -1.76
CBF5YLR175W TMS1Q12116 473 aa4.05□□□□□ -1.76
CBF5YLR175W MED2Q12124 431 aa4.05□□□□□ -1.76
CBF5YLR175W BAG7Q12128 409 aa4.05□□□□□ -1.76
CBF5YLR175W YPR1Q12458 312 aa4.05□□□□□ -1.76
CBF5YLR175W SFG1Q12507 346 aa4.05□□□□□ -1.76
CBF5YLR175W DCP1Q12517 231 aaPredicted RBP4.05□□□□□ -1.76
CBF5YLR175W DIF1O13577 133 aa4.04□□□□□ -1.76
CBF5YLR175W SCEIP03882 235 aa4.04□□□□□ -1.76
CBF5YLR175W RPL7AP05737 244 aaKnown RBP4.04□□□□□ -1.76
CBF5YLR175W SIR2P06700 562 aa4.04□□□□□ -1.76
CBF5YLR175W SPO7P18410 259 aa4.04□□□□□ -1.76
CBF5YLR175W MDH2P22133 377 aa4.04□□□□□ -1.76
CBF5YLR175W PPA2P28239 310 aa4.04□□□□□ -1.76
CBF5YLR175W APD1P38281 316 aa4.04□□□□□ -1.76
CBF5YLR175W MBA1P38300 278 aa4.04□□□□□ -1.76
CBF5YLR175W NIT2P47016 307 aa4.04□□□□□ -1.76
CBF5YLR175W PMT5P52867 743 aa4.04□□□□□ -1.76
CBF5YLR175W BRR6P53062 197 aa4.04□□□□□ -1.76
CBF5YLR175W YGL204CP53089 101 aa4.04□□□□□ -1.76
CBF5YLR175W YGR066CP53242 292 aa4.04□□□□□ -1.76
CBF5YLR175W VOA1P53262 265 aa4.04□□□□□ -1.76
CBF5YLR175W SAY1P53324 424 aa4.04□□□□□ -1.76
CBF5YLR175W TDA1Q03533 586 aa4.04□□□□□ -1.76
CBF5YLR175W RVB1Q03940 463 aaKnown RBP4.04□□□□□ -1.76
CBF5YLR175W HLR1Q04429 423 aa4.04□□□□□ -1.76
CBF5YLR175W GPN3Q06543 272 aa4.04□□□□□ -1.76
CBF5YLR175W NGL1Q08213 363 aaKnown RBP4.04□□□□□ -1.76
CBF5YLR175W MED7Q08278 222 aa4.04□□□□□ -1.76
CBF5YLR175W RPL7BQ12213 244 aaKnown RBP4.04□□□□□ -1.76
CBF5YLR175W IES3Q12345 250 aa4.04□□□□□ -1.76
CBF5YLR175W YHR214C-EQ8TGK0 99 aa4.04□□□□□ -1.76
CBF5YLR175W YBR182C-AQ8TGU6 64 aa4.04□□□□□ -1.76
CBF5YLR175W Q0144Q9ZZW2 109 aa4.04□□□□□ -1.76
CBF5YLR175W BLM10P43583 2143 aa4.03□□□□□ -1.76
CBF5YLR175W MSW1P04803 379 aa4.03□□□□□ -1.76
CBF5YLR175W RPS13P05756 151 aaKnown RBP4.03□□□□□ -1.76
CBF5YLR175W KIN28P06242 306 aa4.03□□□□□ -1.76
CBF5YLR175W CBP6P07253 162 aaPredicted RBP4.03□□□□□ -1.76
CBF5YLR175W NFT1P0CE68 1218 aa4.03□□□□□ -1.76
CBF5YLR175W CTA1P15202 515 aa4.03□□□□□ -1.76
CBF5YLR175W ZRT3P34240 503 aa4.03□□□□□ -1.76
CBF5YLR175W COS9P36034 407 aa4.03□□□□□ -1.76
CBF5YLR175W AIM3P38266 947 aaKnown RBP4.03□□□□□ -1.76
CBF5YLR175W PEX32P38292 413 aa4.03□□□□□ -1.76
CBF5YLR175W YEL057CP39983 233 aa4.03□□□□□ -1.76
CBF5YLR175W RTT105P40063 208 aa4.03□□□□□ -1.76
CBF5YLR175W BNA6P43619 295 aa4.03□□□□□ -1.76
CBF5YLR175W YJR096WP47137 282 aa4.03□□□□□ -1.76
CBF5YLR175W MRPL19P53875 158 aa4.03□□□□□ -1.76
CBF5YLR175W AIM36Q03798 255 aa4.03□□□□□ -1.76
CBF5YLR175W GPI17Q04080 534 aa4.03□□□□□ -1.76
CBF5YLR175W MRX8Q05473 314 aa4.03□□□□□ -1.76
CBF5YLR175W HRI1Q05905 244 aaKnown RBP4.03□□□□□ -1.76
CBF5YLR175W TSR2Q06672 205 aaKnown RBP4.03□□□□□ -1.76
CBF5YLR175W YOR378WQ08902 515 aa4.03□□□□□ -1.76
CBF5YLR175W HMS1Q12398 434 aa4.03□□□□□ -1.76
CBF5YLR175W SUS1Q6WNK7 96 aa4.03□□□□□ -1.76
CBF5YLR175W RPN13O13563 156 aa4.02□□□□□ -1.77
CBF5YLR175W STE12P13574 688 aa4.02□□□□□ -1.77
CBF5YLR175W BOS1P25385 244 aa4.02□□□□□ -1.77
CBF5YLR175W RPD3P32561 433 aa4.02□□□□□ -1.77
CBF5YLR175W PAU2P32612 120 aa4.02□□□□□ -1.77
CBF5YLR175W MTH1P35198 433 aa4.02□□□□□ -1.77
CBF5YLR175W SFK1P35735 353 aa4.02□□□□□ -1.77
CBF5YLR175W SHE2P36068 246 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
CBF5YLR175W ANR2P36090 516 aaPredicted RBP4.02□□□□□ -1.77
CBF5YLR175W MRPL39P36533 70 aa4.02□□□□□ -1.77
CBF5YLR175W YBR096WP38256 230 aa4.02□□□□□ -1.77
CBF5YLR175W SDS24P38314 527 aa4.02□□□□□ -1.77
CBF5YLR175W PTH1P38876 190 aaKnown RBP4.02□□□□□ -1.77
CBF5YLR175W PHB1P40961 287 aa4.02□□□□□ -1.77
CBF5YLR175W RMD9P53140 646 aaKnown RBP4.02□□□□□ -1.77
CBF5YLR175W RPN14P53196 417 aa4.02□□□□□ -1.77
CBF5YLR175W PCP1P53259 346 aa4.02□□□□□ -1.77
CBF5YLR175W MTM1P53320 366 aa4.02□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms