RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W BNA6P43619 295 aa3.9□□□□□ -1.79
PRE9YGR135W CGR1P53188 120 aa3.9□□□□□ -1.79
PRE9YGR135W YGR026WP53217 278 aa3.9□□□□□ -1.79
PRE9YGR135W MET31Q03081 177 aa3.9□□□□□ -1.79
PRE9YGR135W SNZ1Q03148 297 aa3.9□□□□□ -1.79
PRE9YGR135W YMR279CQ03263 540 aa3.9□□□□□ -1.79
PRE9YGR135W TDA1Q03533 586 aa3.9□□□□□ -1.79
PRE9YGR135W SMA2Q04658 369 aa3.9□□□□□ -1.79
PRE9YGR135W SPO77Q06134 477 aa3.9□□□□□ -1.79
PRE9YGR135W YLR173WQ06247 608 aa3.9□□□□□ -1.79
PRE9YGR135W IPK1Q06667 281 aa3.9□□□□□ -1.79
PRE9YGR135W MCH4Q08268 501 aa3.9□□□□□ -1.79
PRE9YGR135W RDR1Q08904 546 aa3.9□□□□□ -1.79
PRE9YGR135W NCE102Q12207 173 aaRIP-Chip data3.9□□□□□ -1.79not detected
PRE9YGR135W SUT2Q12286 268 aa3.9□□□□□ -1.79
PRE9YGR135W DGK1Q12382 290 aa3.9□□□□□ -1.79
PRE9YGR135W YCL012CQ8J0M4 134 aa3.9□□□□□ -1.79
PRE9YGR135W YPR096CO13587 100 aa3.89□□□□□ -1.79
PRE9YGR135W COX3P00420 269 aa3.89□□□□□ -1.79
PRE9YGR135W MSF1P08425 469 aa3.89□□□□□ -1.79
PRE9YGR135W AQY1P0CD91 305 aa3.89□□□□□ -1.79
PRE9YGR135W MAS2P11914 482 aa3.89□□□□□ -1.79
PRE9YGR135W RPB8P20436 146 aa3.89□□□□□ -1.79
PRE9YGR135W SAG1P20840 650 aa3.89□□□□□ -1.79
PRE9YGR135W PRE7P23724 241 aaKnown RBP3.89□□□□□ -1.79
PRE9YGR135W DCC1P25559 380 aa3.89□□□□□ -1.79
PRE9YGR135W NRP1P32770 719 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
PRE9YGR135W PDC2P32896 925 aa3.89□□□□□ -1.79
PRE9YGR135W SFC1P33303 322 aa3.89□□□□□ -1.79
PRE9YGR135W LHP1P33399 275 aaKnown RBP3.89□□□□□ -1.79
PRE9YGR135W SOR1P35497 357 aaKnown RBP3.89□□□□□ -1.79
PRE9YGR135W SRY1P36007 326 aa3.89□□□□□ -1.79
PRE9YGR135W YBR063CP38083 404 aa3.89□□□□□ -1.79
PRE9YGR135W BMT2P38278 337 aa3.89□□□□□ -1.79
PRE9YGR135W URA8P38627 578 aaPredicted RBP3.89□□□□□ -1.79
PRE9YGR135W LAG1P38703 411 aa3.89□□□□□ -1.79
PRE9YGR135W YHR035WP38769 630 aa3.89□□□□□ -1.79
PRE9YGR135W UBA4P38820 440 aa3.89□□□□□ -1.79
PRE9YGR135W NSG1P38837 291 aa3.89□□□□□ -1.79
PRE9YGR135W GPI16P38875 610 aa3.89□□□□□ -1.79
PRE9YGR135W YMR144WP40214 342 aaKnown RBP3.89□□□□□ -1.79
PRE9YGR135W GTT1P40582 234 aa3.89□□□□□ -1.79
PRE9YGR135W PFS2P42841 465 aaKnown RBP3.89□□□□□ -1.79
PRE9YGR135W LSM8P47093 109 aaKnown RBP3.89□□□□□ -1.79
PRE9YGR135W LYS20P48570 428 aaKnown RBP3.89□□□□□ -1.79
PRE9YGR135W BNA7Q04066 261 aa3.89□□□□□ -1.79
PRE9YGR135W VPS74Q06385 345 aa3.89□□□□□ -1.79
PRE9YGR135W SOR2Q07786 357 aa3.89□□□□□ -1.79
PRE9YGR135W SKI7Q08491 747 aaPredicted RBP3.89□□□□□ -1.79
PRE9YGR135W YPR022CQ12139 1133 aa3.89□□□□□ -1.79
PRE9YGR135W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
PRE9YGR135W YLR108CQ12259 485 aa3.89□□□□□ -1.79
PRE9YGR135W MRX4Q12467 430 aa3.89□□□□□ -1.79
PRE9YGR135W PSF1Q12488 208 aa3.89□□□□□ -1.79
PRE9YGR135W YOS9Q99220 542 aa3.89□□□□□ -1.79
PRE9YGR135W LAA1P39526 2014 aa3.88□□□□□ -1.79
PRE9YGR135W SCEIP03882 235 aa3.88□□□□□ -1.79
PRE9YGR135W CDC21P06785 304 aa3.88□□□□□ -1.79
PRE9YGR135W PET9P18239 318 aaKnown RBP3.88□□□□□ -1.79
PRE9YGR135W ERD2P18414 219 aa3.88□□□□□ -1.79
PRE9YGR135W APA2P22108 325 aa3.88□□□□□ -1.79
PRE9YGR135W RPS1BP23248 255 aaKnown RBP3.88□□□□□ -1.79
PRE9YGR135W RNA14P25298 677 aaKnown RBP3.88□□□□□ -1.79
PRE9YGR135W PET18P25362 215 aa3.88□□□□□ -1.79
PRE9YGR135W GEX1P25596 615 aa3.88□□□□□ -1.79
PRE9YGR135W FUN19P28003 413 aaPredicted RBP3.88□□□□□ -1.79
PRE9YGR135W YBL010CP32788 280 aa3.88□□□□□ -1.79
PRE9YGR135W EMP24P32803 203 aaKnown RBP3.88□□□□□ -1.79
PRE9YGR135W TMA19P35691 167 aaKnown RBP3.88□□□□□ -1.79
PRE9YGR135W VPS51P36116 164 aa3.88□□□□□ -1.79
PRE9YGR135W COS8P38723 381 aa3.88□□□□□ -1.79
PRE9YGR135W YIL060WP40519 144 aa3.88□□□□□ -1.79
PRE9YGR135W YIL024CP40543 189 aa3.88□□□□□ -1.79
PRE9YGR135W GLR1P41921 483 aaKnown RBP3.88□□□□□ -1.79
PRE9YGR135W YGR201CP42936 225 aa3.88□□□□□ -1.79
PRE9YGR135W TAX4P47030 604 aa3.88□□□□□ -1.79
PRE9YGR135W YGL114WP53134 725 aa3.88□□□□□ -1.79
PRE9YGR135W PNC1P53184 216 aaKnown RBP3.88□□□□□ -1.79
PRE9YGR135W YIF1P53845 314 aaKnown RBP3.88□□□□□ -1.79
PRE9YGR135W GIP3Q03016 1276 aa3.88□□□□□ -1.79
PRE9YGR135W ECM18Q04623 453 aa3.88□□□□□ -1.79
PRE9YGR135W MDM30Q05930 598 aa3.88□□□□□ -1.79
PRE9YGR135W ARR2Q06597 130 aa3.88□□□□□ -1.79
PRE9YGR135W NDD1Q08887 554 aa3.88□□□□□ -1.79
PRE9YGR135W ATG41Q12048 136 aa3.88□□□□□ -1.79
PRE9YGR135W SFM1Q12314 213 aa3.88□□□□□ -1.79
PRE9YGR135W MES1P00958 751 aaKnown RBP3.87□□□□□ -1.79
PRE9YGR135W ARG80P07249 177 aa3.87□□□□□ -1.79
PRE9YGR135W RPS18AP0CX55 146 aaKnown RBP3.87□□□□□ -1.79
PRE9YGR135W RPS18BP0CX56 146 aaPredicted RBP3.87□□□□□ -1.79
PRE9YGR135W MER1P16523 270 aa3.87□□□□□ -1.79
PRE9YGR135W DAL81P21657 970 aa3.87□□□□□ -1.79
PRE9YGR135W MAG1P22134 296 aaKnown RBP3.87□□□□□ -1.79
PRE9YGR135W RBK1P25332 333 aa3.87□□□□□ -1.79
PRE9YGR135W SLM5P25345 492 aaKnown RBP3.87□□□□□ -1.79
PRE9YGR135W YCP4P25349 247 aaKnown RBP3.87□□□□□ -1.79
PRE9YGR135W ATP11P32453 318 aa3.87□□□□□ -1.79
PRE9YGR135W KRE6P32486 720 aa3.87□□□□□ -1.79
PRE9YGR135W SRB6P32570 121 aa3.87□□□□□ -1.79
PRE9YGR135W TIP20P33891 701 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms