RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C YJL118WP47022 219 aa3.16□□□□□ -1.9
SCL1YGL011C KAP114P53067 1004 aa3.16□□□□□ -1.9
SCL1YGL011C MPP6P53725 186 aaPredicted RBP3.16□□□□□ -1.9
SCL1YGL011C KAP95Q06142 861 aaKnown RBP3.16□□□□□ -1.9
SCL1YGL011C SEC10Q06245 871 aa3.16□□□□□ -1.9
SCL1YGL011C YOL163WP0CF20 169 aa3.15□□□□□ -1.91
SCL1YGL011C VPS1P21576 704 aaKnown RBP3.15□□□□□ -1.91
SCL1YGL011C PEX3P28795 441 aa3.15□□□□□ -1.91
SCL1YGL011C PHO89P38361 574 aa3.15□□□□□ -1.91
SCL1YGL011C SPO73P40031 143 aa3.15□□□□□ -1.91
SCL1YGL011C OST6Q03723 332 aa3.15□□□□□ -1.91
SCL1YGL011C PER33Q12144 273 aa3.15□□□□□ -1.91
SCL1YGL011C PRR2Q12310 699 aa3.15□□□□□ -1.91
SCL1YGL011C YOS9Q99220 542 aa3.15□□□□□ -1.91
SCL1YGL011C COX2P00410 251 aa3.14□□□□□ -1.91
SCL1YGL011C RPL24AP04449 155 aaKnown RBP3.14□□□□□ -1.91
SCL1YGL011C CAM1P29547 415 aaKnown RBP3.14□□□□□ -1.91
SCL1YGL011C IME2P32581 645 aa3.14□□□□□ -1.91
SCL1YGL011C RPE1P46969 238 aa3.14□□□□□ -1.91
SCL1YGL011C TAD2P47058 250 aa3.14□□□□□ -1.91
SCL1YGL011C MNT4P53745 580 aa3.14□□□□□ -1.91
SCL1YGL011C CTR3Q06686 241 aa3.14□□□□□ -1.91
SCL1YGL011C ERG2P32352 222 aa3.13□□□□□ -1.91
SCL1YGL011C PET100P38958 111 aa3.13□□□□□ -1.91
SCL1YGL011C NPT1P39683 429 aaKnown RBP3.13□□□□□ -1.91
SCL1YGL011C BUD13P46947 266 aaPredicted RBP3.13□□□□□ -1.91
SCL1YGL011C YNL095CP53932 642 aa3.13□□□□□ -1.91
SCL1YGL011C SWS2P53937 143 aa3.13□□□□□ -1.91
SCL1YGL011C YPL039WQ03080 316 aa3.13□□□□□ -1.91
SCL1YGL011C TVP15Q03860 143 aa3.13□□□□□ -1.91
SCL1YGL011C AI5_BETAQ9ZZX0 354 aa3.13□□□□□ -1.91
SCL1YGL011C TRM7P38238 310 aaKnown RBP3.12□□□□□ -1.91
SCL1YGL011C PRM9P39551 298 aa3.12□□□□□ -1.91
SCL1YGL011C NBP1P52919 319 aaPredicted RBP3.12□□□□□ -1.91
SCL1YGL011C ALG9P53868 555 aaKnown RBP3.12□□□□□ -1.91
SCL1YGL011C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
SCL1YGL011C YMR166CQ03829 368 aa3.12□□□□□ -1.91
SCL1YGL011C YDR114CQ04597 100 aa3.12□□□□□ -1.91
SCL1YGL011C RRT8Q08219 342 aa3.12□□□□□ -1.91
SCL1YGL011C MRX4Q12467 430 aa3.12□□□□□ -1.91
SCL1YGL011C STH1P32597 1359 aa3.12□□□□□ -1.91
SCL1YGL011C POL30P15873 258 aaKnown RBP3.11□□□□□ -1.91
SCL1YGL011C HMT1P38074 348 aa3.11□□□□□ -1.91
SCL1YGL011C HEK2P38199 381 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
SCL1YGL011C ARN2P38724 620 aa3.11□□□□□ -1.91
SCL1YGL011C SHC1P39000 512 aa3.11□□□□□ -1.91
SCL1YGL011C DDI1P40087 428 aa3.11□□□□□ -1.91
SCL1YGL011C NBP35P52920 328 aa3.11□□□□□ -1.91
SCL1YGL011C MIG2P53035 382 aa3.11□□□□□ -1.91
SCL1YGL011C TIM21P53220 239 aa3.11□□□□□ -1.91
SCL1YGL011C HIS1P00498 297 aaKnown RBP3.1□□□□□ -1.91
SCL1YGL011C MET2P08465 486 aa3.1□□□□□ -1.91
SCL1YGL011C ALK2P32789 676 aaPredicted RBP3.1□□□□□ -1.91
SCL1YGL011C RPT5P33297 434 aaKnown RBP3.1□□□□□ -1.91
SCL1YGL011C YER084WP40057 128 aa3.1□□□□□ -1.91
SCL1YGL011C YAR1P46683 200 aa3.1□□□□□ -1.91
SCL1YGL011C YJL144WP47009 104 aa3.1□□□□□ -1.91
SCL1YGL011C HSH155P49955 971 aaKnown RBP3.1□□□□□ -1.91
SCL1YGL011C RSM27P53305 110 aa3.1□□□□□ -1.91
SCL1YGL011C YOL107WQ12239 342 aa3.1□□□□□ -1.91
SCL1YGL011C NUP157P40064 1391 aaKnown RBP3.1□□□□□ -1.91
SCL1YGL011C RPL4AP10664 362 aaKnown RBP3.09□□□□□ -1.91
SCL1YGL011C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
SCL1YGL011C SDH4P37298 181 aa3.09□□□□□ -1.91
SCL1YGL011C YHL049CP38722 271 aa3.09□□□□□ -1.91
SCL1YGL011C SUR2P38992 349 aa3.09□□□□□ -1.91
SCL1YGL011C RPL4BP49626 362 aaKnown RBP3.09□□□□□ -1.91
SCL1YGL011C MAL13P53338 473 aa3.09□□□□□ -1.91
SCL1YGL011C CTS2Q06350 511 aa3.09□□□□□ -1.91
SCL1YGL011C RLP24Q07915 199 aaKnown RBP3.09□□□□□ -1.91
SCL1YGL011C YOL019WQ08157 551 aa3.09□□□□□ -1.91
SCL1YGL011C SME1Q12330 94 aaPredicted RBP3.09□□□□□ -1.91
SCL1YGL011C YBL112CQ3E7Y4 105 aa3.09□□□□□ -1.91
SCL1YGL011C TDH2P00358 332 aaKnown RBP3.08□□□□□ -1.92
SCL1YGL011C ZWF1P11412 505 aaKnown RBP3.08□□□□□ -1.92
SCL1YGL011C KRE1P17260 313 aa3.08□□□□□ -1.92
SCL1YGL011C RRT12P25381 491 aa3.08□□□□□ -1.92
SCL1YGL011C MIG1P27705 504 aa3.08□□□□□ -1.92
SCL1YGL011C YUH1P35127 236 aa3.08□□□□□ -1.92
SCL1YGL011C CSG2P35206 410 aa3.08□□□□□ -1.92
SCL1YGL011C SPL2P38839 148 aa3.08□□□□□ -1.92
SCL1YGL011C OST3P48439 350 aa3.08□□□□□ -1.92
SCL1YGL011C ATC1Q04005 294 aa3.08□□□□□ -1.92
SCL1YGL011C HRT1Q08273 121 aa3.08□□□□□ -1.92
SCL1YGL011C FEX1Q08913 375 aa3.08□□□□□ -1.92
SCL1YGL011C FEX2Q08991 375 aa3.08□□□□□ -1.92
SCL1YGL011C YPL150WQ12152 901 aa3.08□□□□□ -1.92
SCL1YGL011C COS2P0CX12 379 aa3.07□□□□□ -1.92
SCL1YGL011C COS3P0CX13 379 aa3.07□□□□□ -1.92
SCL1YGL011C YJR012CP47087 207 aa3.07□□□□□ -1.92
SCL1YGL011C YGL088WP53151 121 aa3.07□□□□□ -1.92
SCL1YGL011C ALG11P53954 548 aaKnown RBP3.07□□□□□ -1.92
SCL1YGL011C ADH6Q04894 360 aaKnown RBP3.07□□□□□ -1.92
SCL1YGL011C TIM22Q12328 207 aa3.07□□□□□ -1.92
SCL1YGL011C MRP1P10662 321 aaKnown RBP3.06□□□□□ -1.92
SCL1YGL011C RSR1P13856 272 aa3.06□□□□□ -1.92
SCL1YGL011C YHI9P38765 294 aa3.06□□□□□ -1.92
SCL1YGL011C EBS1Q03466 884 aaKnown RBP3.06□□□□□ -1.92
SCL1YGL011C BTS1Q12051 335 aa3.06□□□□□ -1.92
SCL1YGL011C YPR096CO13587 100 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 107.4 ms