RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	NUP157	P40064	1391 aa	Known RBP	5.24	□□□□□ -1.57
CHL4	YDR254W	TPI1	P00942	248 aa	Known RBP	5.24	□□□□□ -1.57
CHL4	YDR254W	HEM2	P05373	342 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	RPL31A	P0C2H8	113 aa	Known RBP	5.24	□□□□□ -1.57
CHL4	YDR254W	EXO70	P19658	623 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	EPT1	P22140	391 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	PPH21	P23594	369 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	TAH1	P25638	111 aa	Predicted RBP	5.24	□□□□□ -1.57
CHL4	YDR254W	INO2	P26798	304 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	TOA2	P32774	122 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	YBL010C	P32788	280 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	YKR041W	P36134	250 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	TVP38	P36164	337 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	POP4	P38336	279 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	YFL040W	P43562	540 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	GPI14	P47088	403 aa	Known RBP	5.24	□□□□□ -1.57
CHL4	YDR254W	OST3	P48439	350 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	MAL13	P53338	473 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	GPI15	P53961	229 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	RHO3	Q00245	231 aa	Known RBP	5.24	□□□□□ -1.57
CHL4	YDR254W	UBC7	Q02159	165 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	TDA1	Q03533	586 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	YKL068W-A	Q3E826	78 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	YKL033W-A	Q86ZR7	236 aa		5.24	□□□□□ -1.57
CHL4	YDR254W	RKR1	Q04781	1562 aa		5.23	□□□□□ -1.57
CHL4	YDR254W	RAD52	P06778	471 aa	Known RBP	5.23	□□□□□ -1.57
CHL4	YDR254W	BCY1	P07278	416 aa	Known RBP	5.23	□□□□□ -1.57
CHL4	YDR254W	MTF1	P14908	341 aa	Known RBP	5.23	□□□□□ -1.57
CHL4	YDR254W	FUN26	P31381	517 aa		5.23	□□□□□ -1.57
CHL4	YDR254W	OCH1	P31755	480 aa		5.23	□□□□□ -1.57
CHL4	YDR254W	YKL097C	P34245	136 aa		5.23	□□□□□ -1.57
CHL4	YDR254W	APL3	P38065	1025 aa		5.23	□□□□□ -1.57
CHL4	YDR254W	TRM7	P38238	310 aa	Known RBP	5.23	□□□□□ -1.57
CHL4	YDR254W	IPI1	P38803	334 aa	Predicted RBP	5.23	□□□□□ -1.57
CHL4	YDR254W	TRM9	P49957	279 aa		5.23	□□□□□ -1.57
CHL4	YDR254W	IMD3	P50095	523 aa	Known RBP	5.23	□□□□□ -1.57
CHL4	YDR254W	YIP4	P53093	235 aa		5.23	□□□□□ -1.57
CHL4	YDR254W	MST27	P53176	234 aa		5.23	□□□□□ -1.57
CHL4	YDR254W	SWC4	P53201	476 aa		5.23	□□□□□ -1.57
CHL4	YDR254W	STP1	Q00947	519 aa		5.23	□□□□□ -1.57
CHL4	YDR254W	RNY1	Q02933	434 aa	Known RBP	5.23	□□□□□ -1.57
CHL4	YDR254W	SDH7	Q04401	133 aa		5.23	□□□□□ -1.57
CHL4	YDR254W	YMR034C	Q05131	434 aa	Predicted RBP	5.23	□□□□□ -1.57
CHL4	YDR254W	MCH4	Q08268	501 aa		5.23	□□□□□ -1.57
CHL4	YDR254W	MEX67	Q99257	599 aa	Known RBP	5.23	□□□□□ -1.57
CHL4	YDR254W	ERD1	P16151	362 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	HEM15	P16622	393 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	GRX2	P17695	143 aa	Known RBP	5.22	□□□□□ -1.57
CHL4	YDR254W	PHO80	P20052	293 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	SCL1	P21243	252 aa	Known RBP	5.22	□□□□□ -1.57
CHL4	YDR254W	YCR023C	P25351	611 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	MKK1	P32490	508 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	SPC34	P36131	295 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	YPT10	P38146	199 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	GAT1	P43574	510 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	KEG1	P43614	200 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	RBL2	P48606	106 aa	Known RBP	5.22	□□□□□ -1.57
CHL4	YDR254W	PYK2	P52489	506 aa	Known RBP	5.22	□□□□□ -1.57
CHL4	YDR254W	COG7	P53195	279 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	DID2	P69771	204 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	SWP1	Q02795	286 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	PFA5	Q03289	374 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	HNT1	Q04344	158 aa	Known RBP	5.22	□□□□□ -1.57
CHL4	YDR254W	BNA5	Q05979	453 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	SME1	Q12330	94 aa	Predicted RBP	5.22	□□□□□ -1.57
CHL4	YDR254W	YDL199C	Q12407	687 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	STH1	P32597	1359 aa		5.22	□□□□□ -1.57
CHL4	YDR254W	CMD1	P06787	147 aa	Known RBP	5.21	□□□□□ -1.58
CHL4	YDR254W	YOL163W	P0CF20	169 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	FRM2	P37261	193 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	YBR056W	P38081	501 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	YBR053C	P38235	358 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	MTC4	P38335	694 aa	Known RBP	5.21	□□□□□ -1.58
CHL4	YDR254W	RCK1	P38622	512 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	NDT80	P38830	627 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	KRE29	P40026	464 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	RIO2	P40160	425 aa	Known RBP	5.21	□□□□□ -1.58
CHL4	YDR254W	YCH1	P42937	148 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	AIM23	P47015	356 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	ASN1	P49089	572 aa	Known RBP	5.21	□□□□□ -1.58
CHL4	YDR254W	MRM2	P53123	320 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	CDH1	P53197	566 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	PDR17	P53844	350 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	SFH1	Q06168	426 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	RRS1	Q08746	203 aa	Known RBP	5.21	□□□□□ -1.58
CHL4	YDR254W	ATP16	Q12165	160 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	PST2	Q12335	198 aa	Known RBP	5.21	□□□□□ -1.58
CHL4	YDR254W	RAX2	Q12465	1220 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	YIR021W-A	Q3E739	70 aa		5.21	□□□□□ -1.58
CHL4	YDR254W	RPL25	P04456	142 aa	Known RBP	5.2	□□□□□ -1.58
CHL4	YDR254W	FCY2	P17064	533 aa		5.2	□□□□□ -1.58
CHL4	YDR254W	TKL1	P23254	680 aa	Known RBP	5.2	□□□□□ -1.58
CHL4	YDR254W	PRE7	P23724	241 aa	Known RBP	5.2	□□□□□ -1.58
CHL4	YDR254W	EXG1	P23776	448 aa	Known RBP	5.2	□□□□□ -1.58
CHL4	YDR254W	RNA14	P25298	677 aa	Known RBP	5.2	□□□□□ -1.58
CHL4	YDR254W	TRX3	P25372	127 aa		5.2	□□□□□ -1.58
CHL4	YDR254W	RPS2	P25443	254 aa	Known RBP	5.2	□□□□□ -1.58
CHL4	YDR254W	YKL075C	P36083	450 aa		5.2	□□□□□ -1.58
CHL4	YDR254W	MRPL28	P36527	147 aa		5.2	□□□□□ -1.58
CHL4	YDR254W	ECM33	P38248	429 aa	Known RBP	5.2	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 92.5 ms