RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 EMC2Q15006 297 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 SHC3Q92529 594 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 PI4K2AQ9BTU6 479 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 ISCUQ9H1K1 167 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 ARHGAP28Q9P2N2 729 aa18.31■□□□□ 0.52
PHGDH-229ENST00000641891 MYPNQ86TC9 1320 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 SYNGAP1Q96PV0 1343 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 ADM5C9JUS6 153 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 POLGP54098 1239 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-229ENST00000641891 PAK2Q13177 524 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 XKR3Q5GH77 459 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 LMBRD2Q68DH5 695 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-229ENST00000641891 SV2AQ7L0J3 742 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 GPD1LQ8N335 351 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 TMC2Q8TDI7 906 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 TATDN2Q93075 761 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 VTI1AQ96AJ9 217 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 IFT74Q96LB3 600 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 PSD3Q9NYI0 1048 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 COQ4Q9Y3A0 265 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 PTPRFP10586 1907 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 TMEM110-MUSTN1A8MSY1 372 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 ALDH5A1P51649 535 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-229ENST00000641891 GPC3P51654 580 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 MFAP3P55082 362 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 WNT7BP56706 349 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 PRPF4BQ13523 1007 aaKnown RBP18.3■□□□□ 0.52
PHGDH-229ENST00000641891 NAA35Q5VZE5 725 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 FBXL13Q8NEE6 735 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 ASAP3Q8TDY4 903 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 R3HDMLQ9H3Y0 253 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 ZNF302Q9NR11 478 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 RAB20Q9NX57 234 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 CTTNBP2NLQ9P2B4 639 aa18.3■□□□□ 0.52
PHGDH-229ENST00000641891 MYH9P35579 1960 aaKnown RBP18.29■□□□□ 0.52
PHGDH-229ENST00000641891 SART1O43290 800 aaKnown RBP18.29■□□□□ 0.52
PHGDH-229ENST00000641891 DDNO94850 711 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-229ENST00000641891 RTP1P59025 263 aa18.29■□□□□ 0.52
PHGDH-229ENST00000641891 FMO1Q01740 532 aa18.29■□□□□ 0.52
PHGDH-229ENST00000641891 ZNF211Q13398 564 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-229ENST00000641891 BRDTQ58F21 947 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-229ENST00000641891 LBX2Q6XYB7 198 aa18.29■□□□□ 0.52
PHGDH-229ENST00000641891 DDX42Q86XP3 938 aaKnown RBP eCLIP18.29■□□□□ 0.523e-6■■■□□ 16.1
PHGDH-229ENST00000641891 CHST13Q8NET6 341 aa18.29■□□□□ 0.52
PHGDH-229ENST00000641891 CALR3Q96L12 384 aaKnown RBP18.29■□□□□ 0.52
PHGDH-229ENST00000641891 NT5C1BQ96P26 610 aa18.29■□□□□ 0.52
PHGDH-229ENST00000641891 NR2E1Q9Y466 385 aa18.29■□□□□ 0.52
PHGDH-229ENST00000641891 OTOFQ9HC10 1997 aa18.29■□□□□ 0.52
PHGDH-229ENST00000641891 FGGP02679 453 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 OATP04181 439 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 ADAT2Q7Z6V5 191 aaKnown RBP18.28■□□□□ 0.52
PHGDH-229ENST00000641891 ZNF516Q92618 1163 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 ALG3Q92685 438 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 MAFBQ9Y5Q3 323 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-229ENST00000641891 RTN2O75298 545 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 GARTP22102 1010 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 UBA1P22314 1058 aaKnown RBP18.28■□□□□ 0.52
PHGDH-229ENST00000641891 ICAM3P32942 547 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 LIG4P49917 911 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 GPC5P78333 572 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 NNTQ13423 1086 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 AADACL2Q6P093 401 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 GADL1Q6ZQY3 521 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 RHOT2Q8IXI1 618 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 DNERQ8NFT8 737 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 AFAP1L1Q8TED9 768 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 HAPLN2Q9GZV7 340 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 AMACRQ9UHK6 382 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 ALG6Q9Y672 507 aa18.28■□□□□ 0.52
PHGDH-229ENST00000641891 ATG7O95352 703 aa18.27■□□□□ 0.52
PHGDH-229ENST00000641891 CYP11B1P15538 503 aa18.27■□□□□ 0.52
PHGDH-229ENST00000641891 GLRA2P23416 452 aa18.27■□□□□ 0.52
PHGDH-229ENST00000641891 ECHS1P30084 290 aa18.27■□□□□ 0.52
PHGDH-229ENST00000641891 CPNE8Q86YQ8 564 aa18.27■□□□□ 0.52
PHGDH-229ENST00000641891 CCDC125Q86Z20 511 aa18.27■□□□□ 0.52
PHGDH-229ENST00000641891 ZIM3Q96PE6 472 aa18.27■□□□□ 0.52
PHGDH-229ENST00000641891 ZNFX1Q9P2E3 1918 aaKnown RBP18.27■□□□□ 0.52
PHGDH-229ENST00000641891 A0A0G2JMZ2 1700 aa18.27■□□□□ 0.51
PHGDH-229ENST00000641891 SOWAHBA6NEL2 793 aa18.27■□□□□ 0.51
PHGDH-229ENST00000641891 COPB2P35606 906 aa18.27■□□□□ 0.51
PHGDH-229ENST00000641891 MARCKSL1P49006 195 aa18.27■□□□□ 0.51
PHGDH-229ENST00000641891 ACOT2P49753 483 aa18.27■□□□□ 0.51
PHGDH-229ENST00000641891 NLRP11P59045 1033 aaKnown RBP18.27■□□□□ 0.51
PHGDH-229ENST00000641891 NCAPG2Q86XI2 1143 aa18.27■□□□□ 0.51
PHGDH-229ENST00000641891 KRT35Q92764 455 aa18.27■□□□□ 0.51
PHGDH-229ENST00000641891 ZBTB45Q96K62 511 aaPredicted RBP18.27■□□□□ 0.51
PHGDH-229ENST00000641891 BTBD6Q96KE9 485 aa18.27■□□□□ 0.51
PHGDH-229ENST00000641891 RNPC3Q96LT9 517 aaKnown RBP18.27■□□□□ 0.51
PHGDH-229ENST00000641891 PCYT2Q99447 389 aa18.27■□□□□ 0.51
PHGDH-229ENST00000641891 SH3GL2Q99962 352 aa18.27■□□□□ 0.51
PHGDH-229ENST00000641891 CELF4Q9BZC1 486 aaKnown RBP18.27■□□□□ 0.51
PHGDH-229ENST00000641891 TAF1DQ9H5J8 278 aaPredicted RBP18.27■□□□□ 0.51
PHGDH-229ENST00000641891 PAPPA2Q9BXP8 1791 aa18.26■□□□□ 0.51
PHGDH-229ENST00000641891 LRRIQ4A6NIV6 560 aa18.26■□□□□ 0.51
PHGDH-229ENST00000641891 ZNF233A6NK53 670 aa18.26■□□□□ 0.51
PHGDH-229ENST00000641891 CCDC188H7C350 402 aa18.26■□□□□ 0.51
PHGDH-229ENST00000641891 HSF2BPO75031 334 aa18.26■□□□□ 0.51
PHGDH-229ENST00000641891 EDN1P05305 212 aa18.26■□□□□ 0.51
PHGDH-229ENST00000641891 CAPN2P17655 700 aa18.26■□□□□ 0.51
PHGDH-229ENST00000641891 GTF2H1P32780 548 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms