RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ALS2CLQ60I27 953 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 FBXL13Q8NEE6 735 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 CHST13Q8NET6 341 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 DNERQ8NFT8 737 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 HELQQ8TDG4 1101 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 TAS1R2Q8TE23 839 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 IFT74Q96LB3 600 aa18.42■□□□□ 0.54
PHGDH-211ENST00000641213 DDX47Q9H0S4 455 aaKnown RBP18.42■□□□□ 0.54
PHGDH-211ENST00000641213 TTC7AQ9ULT0 858 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-211ENST00000641213 SART1O43290 800 aaKnown RBP18.41■□□□□ 0.54
PHGDH-211ENST00000641213 ITGA4P13612 1032 aa18.41■□□□□ 0.54
PHGDH-211ENST00000641213 ATP4AP20648 1035 aa18.41■□□□□ 0.54
PHGDH-211ENST00000641213 GTF2H1P32780 548 aa18.41■□□□□ 0.54
PHGDH-211ENST00000641213 ICAM3P32942 547 aa18.41■□□□□ 0.54
PHGDH-211ENST00000641213 ERVK-9P63128 1117 aa18.41■□□□□ 0.54
PHGDH-211ENST00000641213 PRPF4BQ13523 1007 aaKnown RBP18.41■□□□□ 0.54
PHGDH-211ENST00000641213 TAF3Q5VWG9 929 aa18.41■□□□□ 0.54
PHGDH-211ENST00000641213 CYFIP1Q7L576 1253 aa18.41■□□□□ 0.54
PHGDH-211ENST00000641213 SLC47A2Q86VL8 602 aa18.41■□□□□ 0.54
PHGDH-211ENST00000641213 AFAP1L1Q8TED9 768 aa18.41■□□□□ 0.54
PHGDH-211ENST00000641213 SH3GL2Q99962 352 aa18.41■□□□□ 0.54
PHGDH-211ENST00000641213 ACP6Q9NPH0 428 aa18.41■□□□□ 0.54
PHGDH-211ENST00000641213 DIS3Q9Y2L1 958 aaKnown RBP18.41■□□□□ 0.54
PHGDH-211ENST00000641213 SNCAIPQ9Y6H5 919 aa18.41■□□□□ 0.54
PHGDH-211ENST00000641213 UTRNP46939 3433 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 CCDC66A2RUB6 948 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 BHMG1C9JSJ3 638 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-211ENST00000641213 ATG7O95352 703 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 GPC5P78333 572 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 EMC2Q15006 297 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 TREML2Q5T2D2 321 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 USP37Q86T82 979 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 ZNF526Q8TF50 670 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-211ENST00000641213 BICD1Q96G01 975 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 NT5C1BQ96P26 610 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 TAF1DQ9H5J8 278 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-211ENST00000641213 RAB20Q9NX57 234 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 CTTNBP2NLQ9P2B4 639 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 MAFBQ9Y5Q3 323 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-211ENST00000641213 SYNGAP1Q96PV0 1343 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 H0YCG3 227 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 PEX10O60683 326 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 HSF2BPO75031 334 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 GZMAP12544 262 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 VGLL4Q14135 290 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 SV2AQ7L0J3 742 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 ANKRD35Q8N283 1001 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 MREGQ8N565 214 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 GOLGA6L1Q8N7Z2 621 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 WHAMMQ8TF30 809 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 FAM213AQ9BRX8 229 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 ZNF302Q9NR11 478 aa18.4■□□□□ 0.54
PHGDH-211ENST00000641213 LRRC37A2A6NM11 1700 aa18.39■□□□□ 0.54
PHGDH-211ENST00000641213 CLSTN1O94985 981 aa18.39■□□□□ 0.53
PHGDH-211ENST00000641213 FGGP02679 453 aa18.39■□□□□ 0.53
PHGDH-211ENST00000641213 MMEP08473 750 aa18.39■□□□□ 0.53
PHGDH-211ENST00000641213 DLATP10515 647 aaKnown RBP18.39■□□□□ 0.53
PHGDH-211ENST00000641213 GUCY2FP51841 1108 aa18.39■□□□□ 0.53
PHGDH-211ENST00000641213 POLGP54098 1239 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-211ENST00000641213 FMO1Q01740 532 aa18.39■□□□□ 0.53
PHGDH-211ENST00000641213 ENPEPQ07075 957 aa18.39■□□□□ 0.53
PHGDH-211ENST00000641213 C11orf63Q6NUN7 778 aa18.39■□□□□ 0.53
PHGDH-211ENST00000641213 DLK2Q6UY11 383 aa18.39■□□□□ 0.53
PHGDH-211ENST00000641213 PROCA1Q8NCQ7 364 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-211ENST00000641213 CARD9Q9H257 536 aa18.39■□□□□ 0.53
PHGDH-211ENST00000641213 ALG6Q9Y672 507 aa18.39■□□□□ 0.53
PHGDH-211ENST00000641213 CAPN2P17655 700 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 ABCD1P33897 745 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 LBX2Q6XYB7 198 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 SEPT14Q6ZU15 432 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 EIF1ADQ8N9N8 165 aaKnown RBP18.38■□□□□ 0.53
PHGDH-211ENST00000641213 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.38■□□□□ 0.53
PHGDH-211ENST00000641213 TATDN2Q93075 761 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 ELMO3Q96BJ8 720 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 SLITRK6Q9H5Y7 841 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 OPA1O60313 960 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 OATP04181 439 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 CYP11B1P15538 503 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 ALDH5A1P51649 535 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-211ENST00000641213 CUL1Q13616 776 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 IQCKQ8N0W5 287 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 TMEM143Q96AN5 459 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 RNPC3Q96LT9 517 aaKnown RBP18.38■□□□□ 0.53
PHGDH-211ENST00000641213 ZIM3Q96PE6 472 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 BTBD7Q9P203 1132 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 KCNG1Q9UIX4 513 aa18.38■□□□□ 0.53
PHGDH-211ENST00000641213 GOLGA6CA6NDK9 693 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 ZNF233A6NK53 670 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 GOLGA8KD6RF30 607 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 EXTL3O43909 919 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 GOLGA6DP0CG33 693 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 ECHS1P30084 290 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 LIG4P49917 911 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 CNKSR2Q8WXI2 1034 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 ZNF516Q92618 1163 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 ALG3Q92685 438 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 GOLGA6AQ9NYA3 693 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 AMACRQ9UHK6 382 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 MTA2O94776 668 aa18.37■□□□□ 0.53
PHGDH-211ENST00000641213 ACTN2P35609 894 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms