RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 CABP7Q86V35 215 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 PPFIBP1Q86W92 1011 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 ZBTB8OSQ8IWT0 167 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 HACE1Q8IYU2 909 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 GSTCDQ8NEC7 633 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 MFSD14AQ96MC6 490 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 RIPOR3Q96MK2 946 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 FZD8Q9H461 694 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 POLD4Q9HCU8 107 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 PRMT7Q9NVM4 692 aaPredicted RBP15.4■□□□□ 0.06
LINC00339-211ENST00000641009 NR2E1Q9Y466 385 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 PIEZO1Q92508 2521 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 USP34Q70CQ2 3546 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 C2CD4DB7Z1M9 353 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 URODP06132 367 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 CYP11B2P19099 503 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 U2AF2P26368 475 aaKnown RBP eCLIP15.4■□□□□ 0.06
LINC00339-211ENST00000641009 CCT6AP40227 531 aaKnown RBP15.4■□□□□ 0.06
LINC00339-211ENST00000641009 FXR2P51116 673 aaKnown RBP eCLIP15.4■□□□□ 0.06
LINC00339-211ENST00000641009 PTPN21Q16825 1174 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 HAUS3Q68CZ6 603 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 KIAA1841Q6NSI8 718 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 RABGGTAQ92696 567 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 PBXIP1Q96AQ6 731 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 PRIMPOLQ96LW4 560 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 FBXL18Q96ME1 805 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 HERC2P3Q9BVR0 1158 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 CACNG4Q9UBN1 327 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 LRWD1Q9UFC0 647 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 PARP2Q9UGN5 583 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 USP20Q9Y2K6 914 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 PCDHB6Q9Y5E3 794 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 DOCK8Q8NF50 2099 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 SPDYE4A6NLX3 237 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 EFEMP2O95967 443 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 EDN1P05305 212 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 LIG1P18858 919 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 PTGDRQ13258 359 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 FAM187BQ17R55 369 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 TMEM132AQ24JP5 1023 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 BMP8AQ7Z5Y6 402 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 ZBTB33Q86T24 672 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 RNF168Q8IYW5 571 aaPredicted RBP15.39■□□□□ 0.05
LINC00339-211ENST00000641009 RPS6KC1Q96S38 1066 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 KIFC3Q9BVG8 833 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 C2orf40Q9H1Z8 148 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 BHMT2Q9H2M3 363 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 PDZD7Q9H5P4 517 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 KIAA1024Q9UPX6 916 aa15.39■□□□□ 0.05
LINC00339-211ENST00000641009 NR1I2O75469 434 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 PRKCBP05771 671 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 MUTP22033 750 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 NAMPTP43490 491 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 GLUD2P49448 558 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 SIGLEC14Q08ET2 396 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 GRIK3Q13003 919 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 PRPF4BQ13523 1007 aaKnown RBP15.38■□□□□ 0.05
LINC00339-211ENST00000641009 MAPK6Q16659 721 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 ATAT1Q5SQI0 421 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 DEPTORQ8TB45 409 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 SNX29Q8TEQ0 813 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 B3GALT6Q96L58 329 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 CCDC113Q9H0I3 377 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 SFXN1Q9H9B4 322 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 DDX19AQ9NUU7 478 aaKnown RBP15.38■□□□□ 0.05
LINC00339-211ENST00000641009 MYO15AQ9UKN7 3530 aa15.38■□□□□ 0.05
LINC00339-211ENST00000641009 PDCD11Q14690 1871 aaKnown RBP15.37■□□□□ 0.05
LINC00339-211ENST00000641009 PP2D1A8MPX8 630 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 N4BP3O15049 544 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 TEX28O15482 410 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 MYBP10242 640 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
LINC00339-211ENST00000641009 RABEP1Q15276 862 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 KIAA0319Q5VV43 1072 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 IGSF22Q8N9C0 903 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 KREMEN2Q8NCW0 462 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 ASIC4Q96FT7 647 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 PAAF1Q9BRP4 392 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 COLEC11Q9BWP8 271 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 GPR62Q9BZJ7 368 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 CXCL16Q9H2A7 254 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 MAN1C1Q9NR34 630 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 SNTG2Q9NY99 539 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 SSX2IPQ9Y2D8 614 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 ZMYM2Q9UBW7 1377 aa15.37■□□□□ 0.05
LINC00339-211ENST00000641009 ACKR2O00590 384 aa15.36■□□□□ 0.05
LINC00339-211ENST00000641009 CD2BP2O95400 341 aaKnown RBP15.36■□□□□ 0.05
LINC00339-211ENST00000641009 ADH1AP07327 375 aa15.36■□□□□ 0.05
LINC00339-211ENST00000641009 CDC25AP30304 524 aa15.36■□□□□ 0.05
LINC00339-211ENST00000641009 DSG1Q02413 1049 aa15.36■□□□□ 0.05
LINC00339-211ENST00000641009 PDIA5Q14554 519 aa15.36■□□□□ 0.05
LINC00339-211ENST00000641009 PPP2R5AQ15172 486 aa15.36■□□□□ 0.05
LINC00339-211ENST00000641009 IL17AQ16552 155 aa15.36■□□□□ 0.05
LINC00339-211ENST00000641009 FUT10Q6P4F1 479 aa15.36■□□□□ 0.05
LINC00339-211ENST00000641009 GPR149Q86SP6 731 aa15.36■□□□□ 0.05
LINC00339-211ENST00000641009 TDRD5Q8NAT2 981 aaKnown RBP15.36■□□□□ 0.05
LINC00339-211ENST00000641009 IFT74Q96LB3 600 aa15.36■□□□□ 0.05
LINC00339-211ENST00000641009 SMOC2Q9H3U7 446 aa15.36■□□□□ 0.05
LINC00339-211ENST00000641009 CHST7Q9NS84 486 aa15.36■□□□□ 0.05
LINC00339-211ENST00000641009 ADAM28Q9UKQ2 775 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms