RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 NAMPTP43490 491 aa16.61■□□□□ 0.25
SPIN3-242ENST00000640577 ERVK-9P63128 1117 aa16.61■□□□□ 0.25
SPIN3-242ENST00000640577 GABPB1Q06547 395 aaPredicted RBP16.61■□□□□ 0.25
SPIN3-242ENST00000640577 MKRN4PQ13434 485 aaPredicted RBP16.61■□□□□ 0.25
SPIN3-242ENST00000640577 CAPSQ13938 189 aa16.61■□□□□ 0.25
SPIN3-242ENST00000640577 KCTD2Q14681 263 aa16.61■□□□□ 0.25
SPIN3-242ENST00000640577 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.61■□□□□ 0.25
SPIN3-242ENST00000640577 ARMC9Q7Z3E5 817 aa16.61■□□□□ 0.25
SPIN3-242ENST00000640577 NOP9Q86U38 636 aaKnown RBP16.61■□□□□ 0.25
SPIN3-242ENST00000640577 FAM71AQ8IYT1 594 aa16.61■□□□□ 0.25
SPIN3-242ENST00000640577 MMGT1Q8N4V1 131 aa16.61■□□□□ 0.25
SPIN3-242ENST00000640577 DHX38Q92620 1227 aaKnown RBP16.61■□□□□ 0.25
SPIN3-242ENST00000640577 PCDHB18PQ96TA0 734 aa16.61■□□□□ 0.25
SPIN3-242ENST00000640577 TARS2Q9BW92 718 aaKnown RBP16.61■□□□□ 0.25
SPIN3-242ENST00000640577 THAP2Q9H0W7 228 aa16.61■□□□□ 0.25
SPIN3-242ENST00000640577 ZNF408Q9H9D4 720 aa16.61■□□□□ 0.25
SPIN3-242ENST00000640577 DMGDHQ9UI17 866 aaKnown RBP16.61■□□□□ 0.25
SPIN3-242ENST00000640577 EVPLQ92817 2033 aa16.61■□□□□ 0.25
SPIN3-242ENST00000640577 MAP2K7O14733 419 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 CALCAP01258 141 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 TNFAIP3P21580 790 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 GPC3P51654 580 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 MKRN3Q13064 507 aaKnown RBP16.6■□□□□ 0.25
SPIN3-242ENST00000640577 CELF3Q5SZQ8 465 aaKnown RBP16.6■□□□□ 0.25
SPIN3-242ENST00000640577 MAP1SQ66K74 1059 aaPredicted RBP16.6■□□□□ 0.25
SPIN3-242ENST00000640577 SCARA3Q6AZY7 606 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 CCDC62Q6P9F0 684 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 SLC47A2Q86VL8 602 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 GSPT2Q8IYD1 628 aaKnown RBP16.6■□□□□ 0.25
SPIN3-242ENST00000640577 FBXL13Q8NEE6 735 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 SLC35G2Q8TBE7 412 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 ZBTB10Q96DT7 871 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 TSKSQ9UJT2 592 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 NOCTQ9UK39 431 aaKnown RBP16.6■□□□□ 0.25
SPIN3-242ENST00000640577 INTUQ9ULD6 942 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 STYXL1Q9Y6J8 313 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 PLXNA1Q9UIW2 1896 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 ATP8B3O60423 1300 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 K7ERI5 159 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 OSBPP22059 807 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 SLC7A5Q01650 507 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 ITIH3Q06033 890 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 SEZ6Q53EL9 994 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 CCDC181Q5TID7 509 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 TAF3Q5VWG9 929 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 SLFN11Q7Z7L1 901 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 DEPTORQ8TB45 409 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 EPS8L1Q8TE68 723 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 PRPF31Q8WWY3 499 aaKnown RBP16.6■□□□□ 0.25
SPIN3-242ENST00000640577 PSPC1Q8WXF1 523 aaKnown RBP16.6■□□□□ 0.25
SPIN3-242ENST00000640577 SHC3Q92529 594 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 UBXN6Q9BZV1 441 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 RAB20Q9NX57 234 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 COG5Q9UP83 839 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 DAAM1Q9Y4D1 1078 aa16.6■□□□□ 0.25
SPIN3-242ENST00000640577 A0A0A6YYK5 440 aaPredicted RBP16.59■□□□□ 0.25
SPIN3-242ENST00000640577 EXTL3O43909 919 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 MAFO75444 373 aaPredicted RBP16.59■□□□□ 0.25
SPIN3-242ENST00000640577 KIF4AO95239 1232 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 C15orf39Q6ZRI6 1047 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 RPUSD2Q8IZ73 545 aaKnown RBP16.59■□□□□ 0.25
SPIN3-242ENST00000640577 GLG1Q92896 1179 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 PDE11AQ9HCR9 933 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 NRBP2Q9NSY0 501 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 CHORDC1Q9UHD1 332 aaPredicted RBP16.59■□□□□ 0.25
SPIN3-242ENST00000640577 STXBP5LQ9Y2K9 1186 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 NCANO14594 1321 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 TARSL2A2RTX5 802 aaKnown RBP16.59■□□□□ 0.25
SPIN3-242ENST00000640577 ZNF233A6NK53 670 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 ATP8B1O43520 1251 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 TMEM253P0C7T8 217 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 STRN3Q13033 797 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 SNAPC2Q13487 334 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 GJC2Q5T442 439 aaPredicted RBP16.59■□□□□ 0.25
SPIN3-242ENST00000640577 FAM160B1Q5W0V3 765 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 TRAPPC12Q8WVT3 735 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 SLC10A4Q96EP9 437 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 ANKFY1Q9P2R3 1169 aa16.59■□□□□ 0.25
SPIN3-242ENST00000640577 AGO2Q9UKV8 859 aaKnown RBP16.59■□□□□ 0.25
SPIN3-242ENST00000640577 KCNK3O14649 394 aa16.58■□□□□ 0.25
SPIN3-242ENST00000640577 BUB1BO60566 1050 aaPredicted RBP16.58■□□□□ 0.25
SPIN3-242ENST00000640577 CCDC172P0C7W6 258 aa16.58■□□□□ 0.25
SPIN3-242ENST00000640577 RFC5P40937 340 aa16.58■□□□□ 0.25
SPIN3-242ENST00000640577 RPS6KA1Q15418 735 aa16.58■□□□□ 0.25
SPIN3-242ENST00000640577 TERF2Q15554 542 aa16.58■□□□□ 0.25
SPIN3-242ENST00000640577 CFAP221Q4G0U5 840 aa16.58■□□□□ 0.25
SPIN3-242ENST00000640577 LRRC71Q8N4P6 559 aa16.58■□□□□ 0.25
SPIN3-242ENST00000640577 KCNN1Q92952 543 aa16.58■□□□□ 0.25
SPIN3-242ENST00000640577 GDAP1L1Q96MZ0 367 aa16.58■□□□□ 0.25
SPIN3-242ENST00000640577 ZHX1Q9UKY1 873 aaPredicted RBP16.58■□□□□ 0.25
SPIN3-242ENST00000640577 H0YCG3 227 aa16.58■□□□□ 0.24
SPIN3-242ENST00000640577 PIGRP01833 764 aa16.58■□□□□ 0.24
SPIN3-242ENST00000640577 GJB1P08034 283 aa16.58■□□□□ 0.24
SPIN3-242ENST00000640577 CLDN10P78369 228 aa16.58■□□□□ 0.24
SPIN3-242ENST00000640577 DAAM2Q86T65 1068 aa16.58■□□□□ 0.24
SPIN3-242ENST00000640577 NT5DC3Q86UY8 548 aa16.58■□□□□ 0.24
SPIN3-242ENST00000640577 RFFLQ8WZ73 363 aa16.58■□□□□ 0.24
SPIN3-242ENST00000640577 SPATA33Q96N06 139 aa16.58■□□□□ 0.24
SPIN3-242ENST00000640577 MROH8Q9H579 483 aa16.58■□□□□ 0.24
SPIN3-242ENST00000640577 PLXNB2O15031 1838 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms