RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 PCDHB2Q9Y5E7 798 aa23.57■■□□□ 1.36
TSPAN9-208ENST00000640568 TTC3P53804 2025 aa23.57■■□□□ 1.36
TSPAN9-208ENST00000640568 A0A0U1RQF3 1178 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 BICDL2A1A5D9 508 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 PPP1R3GB7ZBB8 358 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 CLIC2O15247 247 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 TGFB1I1O43294 461 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 CCDC192P0DO97 292 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 PAK1Q13153 545 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 RNF169Q8NCN4 708 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 NOC3LQ8WTT2 800 aaKnown RBP23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 NELFBQ8WX92 580 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 HERVK_113Q902F9 699 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 P2RX5Q93086 422 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 AGO2Q9UKV8 859 aaKnown RBP23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 TNRC18O15417 2968 aaPredicted RBP23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 C9IYK1 514 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 CCNE1P24864 410 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 WDR5P61964 334 aaKnown RBP23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 TYRO3Q06418 890 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 ECHDC2Q86YB7 292 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 THNSL1Q8IYQ7 743 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 PGBD4Q96DM1 585 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 GDF15Q99988 308 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 CBWD1Q9BRT8 395 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 APOL6Q9BWW8 343 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 PCIF1Q9H4Z3 704 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 IPPQ9Y573 584 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 PCDHB7Q9Y5E2 793 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 STYXL1Q9Y6J8 313 aa23.56■■□□□ 1.36
TSPAN9-208ENST00000640568 ABLIM1O14639 778 aa23.55■■□□□ 1.36
TSPAN9-208ENST00000640568 KIAA0391O15091 583 aaKnown RBP23.55■■□□□ 1.36
TSPAN9-208ENST00000640568 LDHAP00338 332 aaKnown RBP23.55■■□□□ 1.36
TSPAN9-208ENST00000640568 STAG3L1P0CL83 205 aa23.55■■□□□ 1.36
TSPAN9-208ENST00000640568 KYAT1Q16773 422 aa23.55■■□□□ 1.36
TSPAN9-208ENST00000640568 CENPPQ6IPU0 288 aa23.55■■□□□ 1.36
TSPAN9-208ENST00000640568 CCDC94Q9BW85 323 aaPredicted RBP23.55■■□□□ 1.36
TSPAN9-208ENST00000640568 GZF1Q9H116 711 aaPredicted RBP23.55■■□□□ 1.36
TSPAN9-208ENST00000640568 SEMA6BQ9H3T3 888 aa23.55■■□□□ 1.36
TSPAN9-208ENST00000640568 NXF3Q9H4D5 531 aaKnown RBP23.55■■□□□ 1.36
TSPAN9-208ENST00000640568 TRAF3IP3Q9Y228 551 aa23.55■■□□□ 1.36
TSPAN9-208ENST00000640568 PTPRSQ13332 1948 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 A0A0B4J269 797 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 OGTO15294 1046 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 ZNF623O75123 536 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 EOMESO95936 686 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 ITGA4P13612 1032 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 ADSSP30520 456 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 CYP2J2P51589 502 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 OSTNP61366 133 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 LRRC63Q05C16 580 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 HSP90AA2PQ14568 343 aaPredicted RBP23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 RNPC3Q96LT9 517 aaKnown RBP23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 HAPLN2Q9GZV7 340 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 ELAC1Q9H777 363 aaKnown RBP23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 TMEM161AQ9NX61 479 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 SNTG2Q9NY99 539 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 HSPBP1Q9NZL4 362 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 SLC4A7Q9Y6M7 1214 aa23.54■■□□□ 1.36
TSPAN9-208ENST00000640568 CEP290O15078 2479 aa23.53■■□□□ 1.36
TSPAN9-208ENST00000640568 UPP2O95045 317 aa23.53■■□□□ 1.36
TSPAN9-208ENST00000640568 NR3C1P04150 777 aa23.53■■□□□ 1.36
TSPAN9-208ENST00000640568 RPL13P26373 211 aaKnown RBP23.53■■□□□ 1.36
TSPAN9-208ENST00000640568 STX17P56962 302 aa23.53■■□□□ 1.36
TSPAN9-208ENST00000640568 NPAS4Q8IUM7 802 aa23.53■■□□□ 1.36
TSPAN9-208ENST00000640568 C12orf56Q8IXR9 622 aa23.53■■□□□ 1.36
TSPAN9-208ENST00000640568 SMG8Q8ND04 991 aaKnown RBP23.53■■□□□ 1.36
TSPAN9-208ENST00000640568 SAAL1Q96ER3 474 aa23.53■■□□□ 1.36
TSPAN9-208ENST00000640568 PARP2Q9UGN5 583 aa23.53■■□□□ 1.36
TSPAN9-208ENST00000640568 HES2Q9Y543 173 aa23.53■■□□□ 1.36
TSPAN9-208ENST00000640568 TRIP11Q15643 1979 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 TRIM49BA6NDI0 452 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 NR2F2P24468 414 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 GRM5P41594 1212 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 YARSP54577 528 aaKnown RBP23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 FAM189BP81408 668 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 DEFB103AP81534 67 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 EDRF1Q3B7T1 1238 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 CT47A1Q5JQC4 288 aaPredicted RBP23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 C9orf50Q5SZB4 431 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 GPD1LQ8N335 351 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 CEP120Q8N960 986 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 XXYLT1Q8NBI6 393 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 ACAP3Q96P50 834 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 SLC9A7Q96T83 725 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 CXXC1Q9P0U4 656 aaPredicted RBP23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 RWDD2AQ9UIY3 292 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 RALGAPA2Q2PPJ7 1873 aa23.52■■□□□ 1.36
TSPAN9-208ENST00000640568 EXOC3O60645 756 aa23.51■■□□□ 1.35
TSPAN9-208ENST00000640568 SHHQ15465 462 aa23.51■■□□□ 1.35
TSPAN9-208ENST00000640568 ZCWPW2Q504Y3 356 aa23.51■■□□□ 1.35
TSPAN9-208ENST00000640568 SEZ6Q53EL9 994 aa23.51■■□□□ 1.35
TSPAN9-208ENST00000640568 ANKRD40Q6AI12 368 aa23.51■■□□□ 1.35
TSPAN9-208ENST00000640568 MRPL10Q7Z7H8 261 aaKnown RBP23.51■■□□□ 1.35
TSPAN9-208ENST00000640568 LPPQ93052 612 aa23.51■■□□□ 1.35
TSPAN9-208ENST00000640568 FAM213AQ9BRX8 229 aa23.51■■□□□ 1.35
TSPAN9-208ENST00000640568 NAT10Q9H0A0 1025 aaKnown RBP23.51■■□□□ 1.35
TSPAN9-208ENST00000640568 KIAA1586Q9HCI6 787 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms