RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 GDF3Q9NR23 364 aa11.16□□□□□ -0.62
PAX6-236ENST00000638685 GOLGA8KD6RF30 607 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 GRIN3BO60391 1043 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 HSF2BPO75031 334 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 SOX5P35711 763 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 CETN1Q12798 172 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 PPFIA1Q13136 1202 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.15□□□□□ -0.62
PAX6-236ENST00000638685 LRRC57Q8N9N7 239 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 USP38Q8NB14 1042 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 OLIG1Q8TAK6 271 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 ACTRT1Q8TDG2 376 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 CALR3Q96L12 384 aaKnown RBP11.15□□□□□ -0.62
PAX6-236ENST00000638685 RUFY1Q96T51 708 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 POP1Q99575 1024 aaKnown RBP11.15□□□□□ -0.62
PAX6-236ENST00000638685 TIPINQ9BVW5 301 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 GPR88Q9GZN0 384 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 DHX33Q9H6R0 707 aaKnown RBP11.15□□□□□ -0.62
PAX6-236ENST00000638685 ATP6V0A4Q9HBG4 840 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 NENFQ9UMX5 172 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 EMSYQ7Z589 1322 aa11.15□□□□□ -0.62
PAX6-236ENST00000638685 CCL15-CCL14A0A0B4J2E2 113 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 AGPSO00116 658 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 KIF4AO95239 1232 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 GCLMP48507 274 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 CCL15Q16663 113 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 PHLDB3Q6NSJ2 640 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 CCDC62Q6P9F0 684 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 METTL7BQ6UX53 244 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 C12orf56Q8IXR9 622 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 XXYLT1Q8NBI6 393 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 TPCN2Q8NHX9 752 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 FAM76AQ8TAV0 307 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 KIFAP3Q92845 792 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 HAPLN2Q9GZV7 340 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 TOPORSQ9NS56 1045 aaPredicted RBP11.14□□□□□ -0.63
PAX6-236ENST00000638685 SMARCAL1Q9NZC9 954 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 EHD2Q9NZN4 543 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 ARHGAP28Q9P2N2 729 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 TMEM59LQ9UK28 342 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 GOLGA6CA6NDK9 693 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 TTLL13PA6NNM8 815 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 A6NNZ2 444 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 F8VZ95 297 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
PAX6-236ENST00000638685 KCNK3O14649 394 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 HEXIM1O94992 359 aaKnown RBP11.14□□□□□ -0.63
PAX6-236ENST00000638685 CELF2O95319 508 aaKnown RBP11.14□□□□□ -0.63
PAX6-236ENST00000638685 GOLGA6DP0CG33 693 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 KRT13P13646 458 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 GLRA2P23416 452 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 STAT5BP51692 787 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 SMTNP53814 917 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 POLGP54098 1239 aaPredicted RBP11.14□□□□□ -0.63
PAX6-236ENST00000638685 WNT7BP56706 349 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 SNRPFP62306 86 aaKnown RBP11.14□□□□□ -0.63
PAX6-236ENST00000638685 TARBP2Q15633 366 aaKnown RBP11.14□□□□□ -0.63
PAX6-236ENST00000638685 TUBB8Q3ZCM7 444 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 SLFN11Q7Z7L1 901 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 GPR20Q99678 358 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 GBA2Q9HCG7 927 aaPredicted RBP11.14□□□□□ -0.63
PAX6-236ENST00000638685 GOLGA6AQ9NYA3 693 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 SUCLA2Q9P2R7 463 aaPredicted RBP11.14□□□□□ -0.63
PAX6-236ENST00000638685 SIP14410 1827 aa11.14□□□□□ -0.63
PAX6-236ENST00000638685 ZBTB42B2RXF5 422 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 EVI5O60447 810 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 TGFB3P10600 412 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 VAMP7P51809 220 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 GUCY2DQ02846 1103 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 NEDD9Q14511 834 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 CST9Q5W186 159 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 INTS8Q75QN2 995 aaKnown RBP11.13□□□□□ -0.63
PAX6-236ENST00000638685 PEX26Q7Z412 305 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 SLC17A8Q8NDX2 589 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 MCPH1Q8NEM0 835 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 WHAMMQ8TF30 809 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 SEPT1Q8WYJ6 367 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 KRT12Q99456 494 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 EPB41L5Q9HCM4 733 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 APEX2Q9UBZ4 518 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 DNAJC12Q9UKB3 198 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 CCDC188H7C350 402 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 PGRMC1O00264 195 aaKnown RBP11.13□□□□□ -0.63
PAX6-236ENST00000638685 DDX3XO00571 662 aaKnown RBP eCLIP11.13□□□□□ -0.63
PAX6-236ENST00000638685 P4HA2O15460 535 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 DKC1O60832 514 aaKnown RBP eCLIP11.13□□□□□ -0.63
PAX6-236ENST00000638685 GLI1P08151 1106 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 ADORA2AP29274 412 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 DNA2P51530 1060 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 MYL7Q01449 175 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 MKRN4PQ13434 485 aaPredicted RBP11.13□□□□□ -0.63
PAX6-236ENST00000638685 DRAP1Q14919 205 aaPredicted RBP11.13□□□□□ -0.63
PAX6-236ENST00000638685 SNRNP35Q16560 246 aaKnown RBP11.13□□□□□ -0.63
PAX6-236ENST00000638685 CELF3Q5SZQ8 465 aaKnown RBP11.13□□□□□ -0.63
PAX6-236ENST00000638685 ARHGEF19Q8IW93 802 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 MREGQ8N565 214 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 SLC30A5Q8TAD4 765 aa11.13□□□□□ -0.63
PAX6-236ENST00000638685 U2AF1L4Q8WU68 220 aaKnown RBP11.13□□□□□ -0.63
PAX6-236ENST00000638685 TRAPPC12Q8WVT3 735 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms