RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 DSG1Q02413 1049 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 TTLL12Q14166 644 aaPredicted RBP12.84□□□□□ -0.35
CAPN3-221ENST00000638141 ZCWPW2Q504Y3 356 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 ARMCX6Q7L4S7 300 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 KBTBD2Q8IY47 623 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 MAGEB6Q8N7X4 407 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 PIP4K2CQ8TBX8 421 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 C10orf82Q8WW14 230 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 ART4Q93070 314 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 NAGPAQ9UK23 515 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 MTMR7Q9Y216 660 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 CCDC194A0A1B0GVG4 234 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 M0R2N6 131 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 C2CD2LO14523 706 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 LGR5O75473 907 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 KRT36O76013 467 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 ASMTLO95671 621 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 BRAFP15056 766 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 POLR2FP61218 127 aaKnown RBP12.84□□□□□ -0.35
CAPN3-221ENST00000638141 CYLC2Q14093 348 aaPredicted RBP12.84□□□□□ -0.35
CAPN3-221ENST00000638141 MPP2Q14168 576 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 RRP1BQ14684 758 aaKnown RBP12.84□□□□□ -0.35
CAPN3-221ENST00000638141 DDB1Q16531 1140 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 RBM46Q8TBY0 533 aaKnown RBP12.84□□□□□ -0.35
CAPN3-221ENST00000638141 CTNNBL1Q8WYA6 563 aaPredicted RBP12.84□□□□□ -0.35
CAPN3-221ENST00000638141 DGCR14Q96DF8 476 aaKnown RBP12.84□□□□□ -0.35
CAPN3-221ENST00000638141 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 CRAMP1Q96RY5 1269 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 MIPEPQ99797 713 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 BTBD10Q9BSF8 475 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 CADM1Q9BY67 442 aaKnown RBP12.84□□□□□ -0.35
CAPN3-221ENST00000638141 GANQ9H2C0 597 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 ARMCX3Q9UH62 379 aaPredicted RBP12.84□□□□□ -0.35
CAPN3-221ENST00000638141 SNX24Q9Y343 169 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 THSD7AQ9UPZ6 1657 aa12.84□□□□□ -0.35
CAPN3-221ENST00000638141 DDX3YO15523 660 aaKnown RBP12.83□□□□□ -0.36
CAPN3-221ENST00000638141 ADARP55265 1226 aaKnown RBP12.83□□□□□ -0.36
CAPN3-221ENST00000638141 FKBP3Q00688 224 aaKnown RBP12.83□□□□□ -0.36
CAPN3-221ENST00000638141 RAPGEF1Q13905 1077 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 SPIDRQ14159 915 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 SLC44A4Q53GD3 710 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 FAM182BQ5T319 152 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 DUS1LQ6P1R4 473 aaKnown RBP12.83□□□□□ -0.36
CAPN3-221ENST00000638141 DSTYKQ6XUX3 929 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 SV2BQ7L1I2 683 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 VPS36Q86VN1 386 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 PASD1Q8IV76 773 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 SLF2Q8IX21 1173 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 SPATA5Q8NB90 893 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 LRRC15Q8TF66 581 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 STMN2Q93045 179 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 PAPPAQ13219 1627 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 NCANO14594 1321 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 AP1G1O43747 822 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 PDE8BO95263 885 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 GGPS1O95749 300 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 SERPINB3P29508 390 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 RPL21P46778 160 aaKnown RBP12.83□□□□□ -0.36
CAPN3-221ENST00000638141 CTC1Q2NKJ3 1217 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 P3H1Q32P28 736 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 RFWD3Q6PCD5 774 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 C3orf62Q6ZUJ4 267 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 ANKRD42Q8N9B4 389 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 CALML4Q96GE6 196 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 MPP4Q96JB8 637 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
CAPN3-221ENST00000638141 TANGO6Q9C0B7 1094 aa12.83□□□□□ -0.36
CAPN3-221ENST00000638141 OR52Z1P0C646 297 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 ZCCHC18P0CG32 403 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 TROVE2P10155 538 aaKnown RBP eCLIP12.82□□□□□ -0.36
CAPN3-221ENST00000638141 FGFR4P22455 802 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 VARSP26640 1264 aaKnown RBP12.82□□□□□ -0.36
CAPN3-221ENST00000638141 FOXN2P32314 431 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 GSTM4Q03013 218 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 PUM3Q15397 648 aaKnown RBP12.82□□□□□ -0.36
CAPN3-221ENST00000638141 SYDE2Q5VT97 1194 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 ALKBH5Q6P6C2 394 aaKnown RBP12.82□□□□□ -0.36
CAPN3-221ENST00000638141 B3GNT6Q6ZMB0 384 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 IRF2BP2Q7Z5L9 587 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 RIBC1Q8N443 379 aaPredicted RBP12.82□□□□□ -0.36
CAPN3-221ENST00000638141 GDAP1Q8TB36 358 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 ZCRB1Q8TBF4 217 aaKnown RBP12.82□□□□□ -0.36
CAPN3-221ENST00000638141 KCNN1Q92952 543 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 ECSITQ9BQ95 431 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 GOLPH3Q9H4A6 298 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 KCNK9Q9NPC2 374 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 NR2E1Q9Y466 385 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 NR2E3Q9Y5X4 410 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 C10orf71Q711Q0 1435 aa12.82□□□□□ -0.36
CAPN3-221ENST00000638141 PP2D1A8MPX8 630 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 GSC2O15499 205 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 EDF1O60869 148 aaKnown RBP12.81□□□□□ -0.36
CAPN3-221ENST00000638141 GH1P01241 217 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 H2AFZP0C0S5 128 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 CREB1P16220 341 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 PORP16435 677 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-221ENST00000638141 TXKP42681 527 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 PHKA1P46020 1223 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 EMP3P54852 163 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 RAB15P59190 212 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms