RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 PGBD4Q96DM1 585 aa24.48■■□□□ 1.51
CHRNA7-231ENST00000637786 ANKFY1Q9P2R3 1169 aa24.48■■□□□ 1.51
CHRNA7-231ENST00000637786 IPPQ9Y573 584 aa24.48■■□□□ 1.51
CHRNA7-231ENST00000637786 PCDHB7Q9Y5E2 793 aa24.48■■□□□ 1.51
CHRNA7-231ENST00000637786 BIN1O00499 593 aa24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 KIAA0391O15091 583 aaKnown RBP24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 TGFB1I1O43294 461 aa24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 ATF7P17544 494 aaPredicted RBP24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 GARTP22102 1010 aa24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 PRCPP42785 496 aa24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 STIM1Q13586 685 aa24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 KYAT1Q16773 422 aa24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 SMYD4Q8IYR2 804 aaPredicted RBP24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 SMG8Q8ND04 991 aaKnown RBP24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 RSPH1Q8WYR4 309 aa24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 ZBTB45Q96K62 511 aaPredicted RBP24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 KCTD10Q9H3F6 313 aa24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 TYW1Q9NV66 732 aaKnown RBP24.47■■□□□ 1.51
CHRNA7-231ENST00000637786 PDXKO00764 312 aa24.46■■□□□ 1.51
CHRNA7-231ENST00000637786 ATP2A2P16615 1042 aaKnown RBP24.46■■□□□ 1.51
CHRNA7-231ENST00000637786 ADSSP30520 456 aa24.46■■□□□ 1.51
CHRNA7-231ENST00000637786 C12orf56Q8IXR9 622 aa24.46■■□□□ 1.51
CHRNA7-231ENST00000637786 ADSSL1Q8N142 457 aa24.46■■□□□ 1.51
CHRNA7-231ENST00000637786 TMEM174Q8WUU8 243 aa24.46■■□□□ 1.51
CHRNA7-231ENST00000637786 HAPLN2Q9GZV7 340 aa24.46■■□□□ 1.51
CHRNA7-231ENST00000637786 IKZF4Q9H2S9 585 aa24.46■■□□□ 1.51
CHRNA7-231ENST00000637786 UBN1Q9NPG3 1134 aa24.46■■□□□ 1.51
CHRNA7-231ENST00000637786 AGPAT3Q9NRZ7 376 aa24.46■■□□□ 1.51
CHRNA7-231ENST00000637786 LRFN2Q9ULH4 789 aa24.46■■□□□ 1.51
CHRNA7-231ENST00000637786 MAPK8IP1Q9UQF2 711 aa24.46■■□□□ 1.51
CHRNA7-231ENST00000637786 HOXA2O43364 376 aa24.45■■□□□ 1.5
CHRNA7-231ENST00000637786 GRM5P41594 1212 aa24.45■■□□□ 1.5
CHRNA7-231ENST00000637786 MATR3P43243 847 aaKnown RBP eCLIP24.45■■□□□ 1.5
CHRNA7-231ENST00000637786 ISM2Q6H9L7 571 aa24.45■■□□□ 1.5
CHRNA7-231ENST00000637786 ZBTB33Q86T24 672 aa24.45■■□□□ 1.5
CHRNA7-231ENST00000637786 POMGNT1Q8WZA1 660 aa24.45■■□□□ 1.5
CHRNA7-231ENST00000637786 MSTO1Q9BUK6 570 aa24.45■■□□□ 1.5
CHRNA7-231ENST00000637786 NXF3Q9H4D5 531 aaKnown RBP24.45■■□□□ 1.5
CHRNA7-231ENST00000637786 TRAF3IP3Q9Y228 551 aa24.45■■□□□ 1.5
CHRNA7-231ENST00000637786 CITO14578 2027 aa24.44■■□□□ 1.5
CHRNA7-231ENST00000637786 TISP43B9A030 160 aa24.44■■□□□ 1.5
CHRNA7-231ENST00000637786 PSMA7O14818 248 aa24.44■■□□□ 1.5
CHRNA7-231ENST00000637786 OGTO15294 1046 aa24.44■■□□□ 1.5
CHRNA7-231ENST00000637786 GJB5O95377 273 aa24.44■■□□□ 1.5
CHRNA7-231ENST00000637786 ITGA4P13612 1032 aa24.44■■□□□ 1.5
CHRNA7-231ENST00000637786 ARMCX5Q6P1M9 558 aa24.44■■□□□ 1.5
CHRNA7-231ENST00000637786 HERC6Q8IVU3 1022 aa24.44■■□□□ 1.5
CHRNA7-231ENST00000637786 MLKLQ8NB16 471 aa24.44■■□□□ 1.5
CHRNA7-231ENST00000637786 DHTKD1Q96HY7 919 aaPredicted RBP24.44■■□□□ 1.5
CHRNA7-231ENST00000637786 AGO2Q9UKV8 859 aaKnown RBP24.44■■□□□ 1.5
CHRNA7-231ENST00000637786 RANBP2P49792 3224 aaKnown RBP24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 PPP1R3GB7ZBB8 358 aa24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 FAM189A1O60320 539 aa24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 LETM1O95202 739 aaPredicted RBP24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 POU5F1Q01860 360 aaKnown RBP24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 MYBPC2Q14324 1141 aa24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 HSP90AA2PQ14568 343 aaPredicted RBP24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 NFIL3Q16649 462 aa24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 CENPPQ6IPU0 288 aa24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 FOXR2Q6PJQ5 311 aa24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 CCDC94Q9BW85 323 aaPredicted RBP24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 GIT1Q9Y2X7 761 aa24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 HES2Q9Y543 173 aa24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 FNDC1Q4ZHG4 1894 aaPredicted RBP24.43■■□□□ 1.5
CHRNA7-231ENST00000637786 CALUO43852 315 aaPredicted RBP24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 DGKIO75912 1065 aa24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 LDHAP00338 332 aaKnown RBP24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 CLTAP09496 248 aa24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 CD44P16070 742 aaKnown RBP24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 NLRP12P59046 1061 aa24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 HTRA4P83105 476 aaPredicted RBP24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 ZCWPW2Q504Y3 356 aa24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 AGMOQ6ZNB7 445 aa24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 SLC9A9Q8IVB4 645 aa24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 CEP120Q8N960 986 aa24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 RNF169Q8NCN4 708 aa24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 CBWD1Q9BRT8 395 aa24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 RSAD1Q9HA92 442 aa24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 RNF19AQ9NV58 838 aa24.42■■□□□ 1.5
CHRNA7-231ENST00000637786 COL4A6Q14031 1691 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 INPPL1O15357 1258 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 UPP2O95045 317 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 HARSP12081 509 aaKnown RBP24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 EDRF1Q3B7T1 1238 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 SASS6Q6UVJ0 657 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 THNSL1Q8IYQ7 743 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 LPPQ93052 612 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 ACAP3Q96P50 834 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 TMEM117Q9H0C3 514 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 RNF39Q9H2S5 420 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 SEMA6BQ9H3T3 888 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 RC3H2Q9HBD1 1191 aaKnown RBP24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 KIAA1586Q9HCI6 787 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 TOPORSQ9NS56 1045 aaPredicted RBP24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 SNTG2Q9NY99 539 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 INSL6Q9Y581 213 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 RALGAPA2Q2PPJ7 1873 aa24.41■■□□□ 1.5
CHRNA7-231ENST00000637786 MEIS3P2A8K0S8 358 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms