RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 B4GALT3O60512 393 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 LILRB3O75022 631 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 ERLIN2O94905 339 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 PDGFBP01127 241 aaPredicted RBP13.98□□□□□ -0.17
CTSD-208ENST00000636843 KLRC2P26717 231 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 FOSBP53539 338 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 SPIRE1Q08AE8 756 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 NCBP1Q09161 790 aaKnown RBP13.98□□□□□ -0.17
CTSD-208ENST00000636843 KANK3Q6NY19 840 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 TMC5Q6UXY8 1006 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 GPR149Q86SP6 731 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 POTEDQ86YR6 584 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 ACSF2Q96CM8 615 aaPredicted RBP13.98□□□□□ -0.17
CTSD-208ENST00000636843 CCDC51Q96ER9 411 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 MTRQ99707 1265 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 NUP62CLQ9H1M0 184 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 SSX2IPQ9Y2D8 614 aa13.98□□□□□ -0.17
CTSD-208ENST00000636843 MYO10Q9HD67 2058 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 SPDYE4A6NLX3 237 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 INPPL1O15357 1258 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 POMCP01189 267 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 CNPP09543 421 aaKnown RBP13.97□□□□□ -0.17
CTSD-208ENST00000636843 ITGA4P13612 1032 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 CLCN4P51793 760 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 AFF1P51825 1210 aaKnown RBP13.97□□□□□ -0.17
CTSD-208ENST00000636843 PTENP60484 403 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 GUCY1B3Q02153 619 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 POU5F1BQ06416 359 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 TFDP1Q14186 410 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 CTTNQ14247 550 aaKnown RBP13.97□□□□□ -0.17
CTSD-208ENST00000636843 NOTUMQ6P988 496 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 OTOP3Q7RTS5 596 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 TPH2Q8IWU9 490 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 SMG8Q8ND04 991 aaKnown RBP13.97□□□□□ -0.17
CTSD-208ENST00000636843 TRIM44Q96DX7 344 aaPredicted RBP13.97□□□□□ -0.17
CTSD-208ENST00000636843 BRMS1Q9HCU9 246 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 BMP2KQ9NSY1 1161 aaPredicted RBP13.97□□□□□ -0.17
CTSD-208ENST00000636843 GJB4Q9NTQ9 266 aa13.97□□□□□ -0.17
CTSD-208ENST00000636843 KMT2EQ8IZD2 1858 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 ZBTB39O15060 712 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 GALR2O43603 387 aaPredicted RBP13.96□□□□□ -0.17
CTSD-208ENST00000636843 SLITRK3O94933 977 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 LYPLA2O95372 231 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 SOD2P04179 222 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 SSBP05455 408 aaKnown RBP eCLIP13.96□□□□□ -0.17
CTSD-208ENST00000636843 ASGR2P07307 311 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 LIG1P18858 919 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 KRT2P35908 639 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 CYP4A11Q02928 519 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 C15orf39Q6ZRI6 1047 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 CCDC149Q6ZUS6 474 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 IFNLR1Q8IU57 520 aaPredicted RBP13.96□□□□□ -0.17
CTSD-208ENST00000636843 ATOH1Q92858 354 aaPredicted RBP13.96□□□□□ -0.17
CTSD-208ENST00000636843 USP28Q96RU2 1077 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 EIF2AK1Q9BQI3 630 aaKnown RBP13.96□□□□□ -0.17
CTSD-208ENST00000636843 HERC2P3Q9BVR0 1158 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 XPNPEP1Q9NQW7 623 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 DPP7Q9UHL4 492 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 IPPQ9Y573 584 aa13.96□□□□□ -0.17
CTSD-208ENST00000636843 TSPAN1O60635 241 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 NR1I2O75469 434 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 DGAT1O75907 488 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 YEATS4O95619 227 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 URODP06132 367 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 TRIM29Q14134 588 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 EARS2Q5JPH6 523 aaKnown RBP13.95□□□□□ -0.18
CTSD-208ENST00000636843 ELMSAN1Q6PJG2 1045 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 COLGALT2Q8IYK4 626 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 CMASQ8NFW8 434 aaPredicted RBP13.95□□□□□ -0.18
CTSD-208ENST00000636843 TNFRSF25Q93038 417 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 RPS6KC1Q96S38 1066 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 HSD17B14Q9BPX1 270 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 FUCA2Q9BTY2 467 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 CSRNP2Q9H175 543 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 ANKEF1Q9NU02 776 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 PCDHA12Q9UN75 941 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 GIT1Q9Y2X7 761 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 PRG3Q9Y2Y8 225 aaPredicted RBP13.95□□□□□ -0.18
CTSD-208ENST00000636843 ARL5CA6NH57 179 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 INO80B-WBP1J3KQ70 363 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 ADH1AP07327 375 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 CCDC192P0DO97 292 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 OR1G1P47890 313 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 CLCN5P51795 746 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 DSC1Q08554 894 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 NR5A1Q13285 461 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 ASTLQ6HA08 431 aaPredicted RBP13.95□□□□□ -0.18
CTSD-208ENST00000636843 CYP26C1Q6V0L0 522 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 HACE1Q8IYU2 909 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 PDLIM2Q96JY6 352 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 GAD1Q99259 594 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 EIF2AQ9BY44 585 aaKnown RBP13.95□□□□□ -0.18
CTSD-208ENST00000636843 NFKBIZQ9BYH8 718 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 RHOBTB2Q9BYZ6 727 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 TNMDQ9H2S6 317 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 MFSD1Q9H3U5 465 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 SMOC2Q9H3U7 446 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 CLSTN2Q9H4D0 955 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 FAM86C1Q9NVL1 165 aa13.95□□□□□ -0.18
CTSD-208ENST00000636843 MARCH5Q9NX47 278 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms