RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 KCNJ1P48048 391 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 SMTNP53814 917 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 TGFB2P61812 414 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 FMO1Q01740 532 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 CEP85LQ5SZL2 805 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 TMEM63BQ5T3F8 832 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 HELQQ8TDG4 1101 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 MAPTP10636 758 aaKnown RBP20.35■□□□□ 0.85
CLN5-216ENST00000636780 JAK3P52333 1124 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 GUCY1A3Q02108 690 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 PASD1Q8IV76 773 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 NSUN6Q8TEA1 469 aaKnown RBP20.35■□□□□ 0.85
CLN5-216ENST00000636780 LMBR1Q8WVP7 490 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 CPA5Q8WXQ8 436 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 SLC9A2Q9UBY0 812 aa20.35■□□□□ 0.85
CLN5-216ENST00000636780 LYPLA2O95372 231 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 GJB6O95452 261 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 HSD17B3P37058 310 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 NLRP11P59045 1033 aaKnown RBP20.34■□□□□ 0.85
CLN5-216ENST00000636780 CETN1Q12798 172 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 UBLCP1Q8WVY7 318 aaPredicted RBP20.34■□□□□ 0.85
CLN5-216ENST00000636780 SH3GL2Q99962 352 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 FAM118BQ9BPY3 351 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 CALCOCO1Q9P1Z2 691 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 ANKFY1Q9P2R3 1169 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 PTPN22Q9Y2R2 807 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 SPDYE16A6NNV3 312 aaPredicted RBP20.34■□□□□ 0.85
CLN5-216ENST00000636780 IRAK1P51617 712 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 GNGT1P63211 74 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 MAP4K3Q8IVH8 894 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 KLRG1Q96E93 195 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 CYP26B1Q9NR63 512 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 SNX24Q9Y343 169 aa20.34■□□□□ 0.85
CLN5-216ENST00000636780 A0A0A6YYK5 440 aaPredicted RBP20.33■□□□□ 0.85
CLN5-216ENST00000636780 DCDC2CA8MYV0 355 aa20.33■□□□□ 0.85
CLN5-216ENST00000636780 PYGMP11217 842 aa20.33■□□□□ 0.85
CLN5-216ENST00000636780 CYP11B1P15538 503 aa20.33■□□□□ 0.85
CLN5-216ENST00000636780 MARK3P27448 753 aa20.33■□□□□ 0.85
CLN5-216ENST00000636780 RAB20Q9NX57 234 aa20.33■□□□□ 0.85
CLN5-216ENST00000636780 LRRIQ4A6NIV6 560 aa20.33■□□□□ 0.84
CLN5-216ENST00000636780 SF3A3Q12874 501 aaKnown RBP eCLIP20.33■□□□□ 0.84
CLN5-216ENST00000636780 KRT39Q6A163 491 aa20.33■□□□□ 0.84
CLN5-216ENST00000636780 CDR2LQ86X02 465 aaPredicted RBP20.33■□□□□ 0.84
CLN5-216ENST00000636780 FAM71AQ8IYT1 594 aa20.33■□□□□ 0.84
CLN5-216ENST00000636780 ASAP3Q8TDY4 903 aa20.33■□□□□ 0.84
CLN5-216ENST00000636780 ISCUQ9H1K1 167 aa20.33■□□□□ 0.84
CLN5-216ENST00000636780 COL11A1P12107 1806 aaPredicted RBP20.33■□□□□ 0.84
CLN5-216ENST00000636780 O00370 1275 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 GHRHRQ02643 423 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 SYCE1Q8N0S2 351 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 ANKRD35Q8N283 1001 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 RASGEF1CQ8N431 466 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 PAGR1Q9BTK6 254 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 NUP85Q9BW27 656 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 NCANO14594 1321 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 FZD9O00144 591 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 TNNI1P19237 187 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 SFNP31947 248 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 GPC5P78333 572 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 CYP24A1Q07973 514 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 CATSPERGQ6ZRH7 1159 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 TRIM50Q86XT4 487 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 ZNF653Q96CK0 615 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 TARS2Q9BW92 718 aaKnown RBP20.32■□□□□ 0.84
CLN5-216ENST00000636780 ANKEF1Q9NU02 776 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 TRPC6Q9Y210 931 aa20.32■□□□□ 0.84
CLN5-216ENST00000636780 KIAA1217Q5T5P2 1943 aa20.31■□□□□ 0.84
CLN5-216ENST00000636780 TTC27Q6P3X3 843 aa20.31■□□□□ 0.84
CLN5-216ENST00000636780 ABHD15Q6UXT9 468 aa20.31■□□□□ 0.84
CLN5-216ENST00000636780 BTBD7Q9P203 1132 aa20.31■□□□□ 0.84
CLN5-216ENST00000636780 INTUQ9ULD6 942 aa20.31■□□□□ 0.84
CLN5-216ENST00000636780 ATP8A1Q9Y2Q0 1164 aa20.31■□□□□ 0.84
CLN5-216ENST00000636780 UMODL1Q5DID0 1318 aa20.31■□□□□ 0.84
CLN5-216ENST00000636780 GJB1P08034 283 aa20.31■□□□□ 0.84
CLN5-216ENST00000636780 POLGP54098 1239 aaPredicted RBP20.31■□□□□ 0.84
CLN5-216ENST00000636780 FBXL13Q8NEE6 735 aa20.31■□□□□ 0.84
CLN5-216ENST00000636780 TEX13BQ9BXU2 312 aa20.31■□□□□ 0.84
CLN5-216ENST00000636780 CAPS2Q9BXY5 557 aa20.31■□□□□ 0.84
CLN5-216ENST00000636780 VPS33BQ9H267 617 aa20.31■□□□□ 0.84
CLN5-216ENST00000636780 SMIM23A6NLE4 172 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 PGK2P07205 417 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 CCT5P48643 541 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 DCAF15Q66K64 600 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 OTUD6AQ7L8S5 288 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 SLC16A10Q8TF71 515 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 FAM107BQ9H098 131 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 TMEM51Q9NW97 253 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 PSAPP07602 524 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 TNFRSF8P28908 595 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 PLTPP55058 493 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 POU5F1Q01860 360 aaKnown RBP20.3■□□□□ 0.84
CLN5-216ENST00000636780 DHX9Q08211 1270 aaKnown RBP20.3■□□□□ 0.84
CLN5-216ENST00000636780 SNX1Q13596 522 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 C10orf67Q8IYJ2 551 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 SHC3Q92529 594 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 FAM212AQ96EL1 285 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 ACAD9Q9H845 621 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 ADM5C9JUS6 153 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 ECM2O94769 699 aaPredicted RBP20.3■□□□□ 0.84
CLN5-216ENST00000636780 DDNO94850 711 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms