RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 FAM213AQ9BRX8 229 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 MSTO1Q9BUK6 570 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 RNF39Q9H2S5 420 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 AGPAT5Q9NUQ2 364 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 TAB2Q9NYJ8 693 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 AGO2Q9UKV8 859 aaKnown RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 EXOC7Q9UPT5 735 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 STYXL1Q9Y6J8 313 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 LTBP2Q14767 1821 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 MROH7Q68CQ1 1323 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 A0A1B0GUA9 196 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 TOM1L1O75674 476 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 KIF20AO95235 890 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 FKBP3Q00688 224 aaKnown RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 ZNF568Q3ZCX4 644 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 LMBRD2Q68DH5 695 aaPredicted RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 DEFB128Q7Z7B8 93 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 CCDC155Q8N6L0 562 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 NAP1L5Q96NT1 182 aaPredicted RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 POP1Q99575 1024 aaKnown RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 APOL6Q9BWW8 343 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 GTPBP4Q9BZE4 634 aaKnown RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 NXF3Q9H4D5 531 aaKnown RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 GRPEL1Q9HAV7 217 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 TOPORSQ9NS56 1045 aaPredicted RBP11.64□□□□□ -0.55
CLN5-213ENST00000636681 TNFSF13BQ9Y275 285 aa11.64□□□□□ -0.55
CLN5-213ENST00000636681 RALGAPA2Q2PPJ7 1873 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 GOLGA6L3A6NEY3 463 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 SMTNL1A8MU46 457 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 KCNJ18B7U540 433 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 GOLGA6L19H0YKK7 550 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 CLDN3O15551 220 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 EXOC3O60645 756 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 TRIM49P0CI25 452 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 TRIM49CP0CI26 452 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 SYN1P17600 705 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 SFPQP23246 707 aaKnown RBP eCLIP11.63□□□□□ -0.55
CLN5-213ENST00000636681 PPP1R2P41236 205 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 SPAG1Q07617 926 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 RBL2Q08999 1139 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 PAK2Q13177 524 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 KCNJ12Q14500 433 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 KRT31Q15323 416 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 C1orf220Q5T0J3 134 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 MPZL3Q6UWV2 235 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 ZPBP2Q6X784 338 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 DBF4BQ8NFT6 615 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 CAGE1Q8TC20 777 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 ELMO3Q96BJ8 720 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 BORCS6Q96GS4 357 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 VPS16Q9H269 839 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 KCNG1Q9UIX4 513 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 TDRD15B5MCY1 1934 aaKnown RBP11.63□□□□□ -0.55
CLN5-213ENST00000636681 PTPRJQ12913 1337 aa11.63□□□□□ -0.55
CLN5-213ENST00000636681 CETN3O15182 167 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 LRRN2O75325 713 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 AKAP5P24588 427 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 CDC42EP1Q00587 391 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 MCL1Q07820 350 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 BFSP2Q13515 415 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 NOLC1Q14978 699 aaKnown RBP eCLIP11.62□□□□□ -0.55
CLN5-213ENST00000636681 CCDC40Q4G0X9 1142 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 TCP11X2Q5H9J9 407 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 CT47A1Q5JQC4 288 aaPredicted RBP11.62□□□□□ -0.55
CLN5-213ENST00000636681 C12orf56Q8IXR9 622 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 FAM186BQ8IYM0 893 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 C7orf61Q8IZ16 206 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 XXYLT1Q8NBI6 393 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 SMG8Q8ND04 991 aaKnown RBP11.62□□□□□ -0.55
CLN5-213ENST00000636681 LPPQ93052 612 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 PRIMPOLQ96LW4 560 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 THAP9Q9H5L6 903 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 INTS13Q9NVM9 706 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 SNTG2Q9NY99 539 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 TEX33O43247 280 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 CAVIN2O95810 425 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 CXCL8P10145 99 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 ACRP10323 421 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 GARTP22102 1010 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 AFF1P51825 1210 aaKnown RBP11.62□□□□□ -0.55
CLN5-213ENST00000636681 FANCCQ00597 558 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 DSC3Q14574 896 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 SNRNP35Q16560 246 aaKnown RBP11.62□□□□□ -0.55
CLN5-213ENST00000636681 TWF2Q6IBS0 349 aaKnown RBP11.62□□□□□ -0.55
CLN5-213ENST00000636681 FILIP1Q7Z7B0 1213 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 SLC9A9Q8IVB4 645 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 TNS4Q8IZW8 715 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 GPD1LQ8N335 351 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 FBXL18Q96ME1 805 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 ADAM2Q99965 735 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 SEZ6LQ9BYH1 1024 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 IFIH1Q9BYX4 1025 aaKnown RBP11.62□□□□□ -0.55
CLN5-213ENST00000636681 MMRN2Q9H8L6 949 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 PDE11AQ9HCR9 933 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 KLK14Q9P0G3 267 aa11.62□□□□□ -0.55
CLN5-213ENST00000636681 TTC3P53804 2025 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 SCN1AP35498 2009 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 OGTO15294 1046 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 STAG3L1P0CL83 205 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms