RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ITGB8P26012 769 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 QARSP47897 775 aaKnown RBP16.82■□□□□ 0.28
CLN8-209ENST00000635970 PSMC5P62195 406 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 MARCH8Q5T0T0 291 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 CAVIN3Q969G5 261 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 HSD17B14Q9BPX1 270 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 CAPS2Q9BXY5 557 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 PPP1R12CQ9BZL4 782 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 LACRTQ9GZZ8 138 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 TMEM39AQ9NV64 488 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 LRWD1Q9UFC0 647 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 SEPT9Q9UHD8 586 aaPredicted RBP16.82■□□□□ 0.28
CLN8-209ENST00000635970 TBX21Q9UL17 535 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 UMODL1Q5DID0 1318 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 NRCAMQ92823 1304 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 CEP290O15078 2479 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 MED24O75448 989 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 STBD1O95210 358 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 GTF2A1P52655 376 aaPredicted RBP16.82■□□□□ 0.28
CLN8-209ENST00000635970 PMS1P54277 932 aaKnown RBP16.82■□□□□ 0.28
CLN8-209ENST00000635970 ADAM17P78536 824 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 PLA2G4FQ68DD2 849 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 PACS2Q86VP3 889 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 TPH2Q8IWU9 490 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 RASSF8Q8NHQ8 419 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 DHX38Q92620 1227 aaKnown RBP16.82■□□□□ 0.28
CLN8-209ENST00000635970 AGPAT5Q9NUQ2 364 aa16.82■□□□□ 0.28
CLN8-209ENST00000635970 RANBP2P49792 3224 aaKnown RBP16.81■□□□□ 0.28
CLN8-209ENST00000635970 ZBTB39O15060 712 aa16.81■□□□□ 0.28
CLN8-209ENST00000635970 HBP1O60381 514 aa16.81■□□□□ 0.28
CLN8-209ENST00000635970 FGFR1OPO95684 399 aaKnown RBP16.81■□□□□ 0.28
CLN8-209ENST00000635970 SPATA31C1P0DKV0 1188 aa16.81■□□□□ 0.28
CLN8-209ENST00000635970 SKOR1P84550 965 aa16.81■□□□□ 0.28
CLN8-209ENST00000635970 ANO5Q75V66 913 aa16.81■□□□□ 0.28
CLN8-209ENST00000635970 CATSPER3Q86XQ3 398 aa16.81■□□□□ 0.28
CLN8-209ENST00000635970 DUSP9Q99956 384 aaKnown RBP16.81■□□□□ 0.28
CLN8-209ENST00000635970 C7orf25Q9BPX7 421 aa16.81■□□□□ 0.28
CLN8-209ENST00000635970 NOC4LQ9BVI4 516 aaKnown RBP16.81■□□□□ 0.28
CLN8-209ENST00000635970 EDEM3Q9BZQ6 932 aa16.81■□□□□ 0.28
CLN8-209ENST00000635970 DEF6Q9H4E7 631 aa16.81■□□□□ 0.28
CLN8-209ENST00000635970 HYOU1Q9Y4L1 999 aa16.81■□□□□ 0.28
CLN8-209ENST00000635970 PDE2AO00408 941 aaPredicted RBP16.8■□□□□ 0.28
CLN8-209ENST00000635970 EIF3HO15372 352 aaKnown RBP eCLIP16.8■□□□□ 0.28
CLN8-209ENST00000635970 PAFAH1B1P43034 410 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 POTEGQ6S5H5 508 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 RUFY4Q6ZNE9 571 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 SPATA4Q8NEY3 305 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 FAM167AQ96KS9 214 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 CNOT6LQ96LI5 555 aaKnown RBP16.8■□□□□ 0.28
CLN8-209ENST00000635970 LOXHD1Q8IVV2 1947 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 RCCD1A6NED2 376 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 PJA2O43164 708 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 USP8P40818 1118 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 MTIF2P46199 727 aaKnown RBP16.8■□□□□ 0.28
CLN8-209ENST00000635970 ECM1Q16610 540 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 MTERF2Q49AM1 385 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 CNNM4Q6P4Q7 775 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 FOXR2Q6PJQ5 311 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 B4GALNT4Q76KP1 1039 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 RNF10Q8N5U6 811 aaKnown RBP16.8■□□□□ 0.28
CLN8-209ENST00000635970 SNX29Q8TEQ0 813 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 RUFY1Q96T51 708 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 RAB34Q9BZG1 259 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 HIPK3Q9H422 1215 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
CLN8-209ENST00000635970 NR2E3Q9Y5X4 410 aa16.8■□□□□ 0.28
CLN8-209ENST00000635970 MBLAC1A4D2B0 266 aaPredicted RBP16.79■□□□□ 0.28
CLN8-209ENST00000635970 H0YGN5 161 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 KIAA0355O15063 1070 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 HSF2BPO75031 334 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 GNAT1P11488 350 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 GUCY2CP25092 1073 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 PDIA5Q14554 519 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 XKR3Q5GH77 459 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 MMS22LQ6ZRQ5 1243 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 SERINC5Q86VE9 423 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 C4orf19Q8IY42 314 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 C1orf131Q8NDD1 294 aaKnown RBP16.79■□□□□ 0.28
CLN8-209ENST00000635970 ERMNQ8TAM6 284 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 NEK9Q8TD19 979 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 PCMTD1Q96MG8 357 aaPredicted RBP16.79■□□□□ 0.28
CLN8-209ENST00000635970 MMTAG2Q9BU76 263 aaKnown RBP16.79■□□□□ 0.28
CLN8-209ENST00000635970 IFIH1Q9BYX4 1025 aaKnown RBP16.79■□□□□ 0.28
CLN8-209ENST00000635970 PRKAG2Q9UGJ0 569 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 PCDHA13Q9Y5I0 950 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 COL1A2P08123 1366 aa16.79■□□□□ 0.28
CLN8-209ENST00000635970 MACROD2A1Z1Q3 448 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 MYBL2P10244 700 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 YWHABP31946 246 aaKnown RBP16.78■□□□□ 0.28
CLN8-209ENST00000635970 CYP2C18P33260 490 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 NPEPPSP55786 919 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 C2orf54Q08AI8 447 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 MIIPQ5JXC2 388 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 EMC10Q5UCC4 262 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 HAUS3Q68CZ6 603 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 MTHFD1LQ6UB35 978 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 SND1Q7KZF4 910 aaKnown RBP eCLIP16.78■□□□□ 0.28
CLN8-209ENST00000635970 PIGOQ8TEQ8 1089 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 OSBPL9Q96SU4 736 aa16.78■□□□□ 0.28
CLN8-209ENST00000635970 POLR3CQ9BUI4 534 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms