RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 LRRC55Q6ZSA7 311 aa9.34□□□□□ -0.91
CDKL5-209ENST00000635828 EXOC8Q8IYI6 725 aa9.34□□□□□ -0.91
CDKL5-209ENST00000635828 ZMAT2Q96NC0 199 aaKnown RBP9.34□□□□□ -0.91
CDKL5-209ENST00000635828 TSPYL2Q9H2G4 693 aaPredicted RBP9.34□□□□□ -0.91
CDKL5-209ENST00000635828 C17orf75Q9HAS0 396 aa9.34□□□□□ -0.91
CDKL5-209ENST00000635828 RGS18Q9NS28 235 aa9.34□□□□□ -0.91
CDKL5-209ENST00000635828 CTNND2Q9UQB3 1225 aa9.34□□□□□ -0.91
CDKL5-209ENST00000635828 INPP5FQ9Y2H2 1132 aa9.34□□□□□ -0.91
CDKL5-209ENST00000635828 CAND2O75155 1236 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 LIG4P49917 911 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 IKBKEQ14164 716 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 ZNF658Q5TYW1 1059 aaPredicted RBP9.33□□□□□ -0.92
CDKL5-209ENST00000635828 SYCP3Q8IZU3 236 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 HELQQ8TDG4 1101 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 SEPT8Q92599 483 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 RNPC3Q96LT9 517 aaKnown RBP9.33□□□□□ -0.92
CDKL5-209ENST00000635828 GSDMAQ96QA5 445 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 TIPINQ9BVW5 301 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 TMEM134Q9H6X4 195 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 PRMT7Q9NVM4 692 aaPredicted RBP9.33□□□□□ -0.92
CDKL5-209ENST00000635828 MTUS1Q9ULD2 1270 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 CITO14578 2027 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 PTPRJQ12913 1337 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 POMCP01189 267 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 CXCL8P10145 99 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 GAP43P17677 238 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 STRN3Q13033 797 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 PPIGQ13427 754 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDKL5-209ENST00000635828 ZSCAN23Q3MJ62 389 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 CBWD2Q8IUF1 395 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 PLEKHO2Q8TD55 490 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 PYM1Q9BRP8 204 aaKnown RBP9.33□□□□□ -0.92
CDKL5-209ENST00000635828 DNAJC25Q9H1X3 360 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 AGPAT3Q9NRZ7 376 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 DLG4P78352 724 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 POU5F1BQ06416 359 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 KCNB1Q14721 858 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 PTPN21Q16825 1174 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 FAM187BQ17R55 369 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 KNOP1Q1ED39 458 aaKnown RBP9.33□□□□□ -0.92
CDKL5-209ENST00000635828 KANK3Q6NY19 840 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 RBM43Q6ZSC3 357 aaKnown RBP9.33□□□□□ -0.92
CDKL5-209ENST00000635828 ECHDC2Q86YB7 292 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 FAM212AQ96EL1 285 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 GAD1Q99259 594 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 FAM213AQ9BRX8 229 aa9.33□□□□□ -0.92
CDKL5-209ENST00000635828 MRPL4Q9BYD3 311 aaKnown RBP9.33□□□□□ -0.92
CDKL5-209ENST00000635828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDKL5-209ENST00000635828 A0A0U1RQF3 1178 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 NT5C1B-RDH14C9J2C7 533 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 ADRB2P07550 413 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 ZSCAN20P17040 1043 aaPredicted RBP9.32□□□□□ -0.92
CDKL5-209ENST00000635828 CCDC183Q5T5S1 534 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 NOTUMQ6P988 496 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 PPP4R3CPQ6ZMV5 832 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 ZNF280BQ86YH2 543 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 ADSSL1Q8N142 457 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 POMGNT1Q8WZA1 660 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 LRCH3Q96II8 777 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 YBX2Q9Y2T7 364 aaKnown RBP9.32□□□□□ -0.92
CDKL5-209ENST00000635828 CLDN3O15551 220 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 CAPN2P17655 700 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 EFNA5P52803 228 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 SLC27A1Q6PCB7 646 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 ZNF598Q86UK7 904 aaKnown RBP9.32□□□□□ -0.92
CDKL5-209ENST00000635828 TMEM173Q86WV6 379 aaPredicted RBP9.32□□□□□ -0.92
CDKL5-209ENST00000635828 TOP1MTQ969P6 601 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 C2orf40Q9H1Z8 148 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 ST6GALNAC4Q9H4F1 302 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 TOPORSQ9NS56 1045 aaPredicted RBP9.32□□□□□ -0.92
CDKL5-209ENST00000635828 DNAJB4Q9UDY4 337 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 KIAA1671Q9BY89 1806 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 TDRD15B5MCY1 1934 aaKnown RBP9.32□□□□□ -0.92
CDKL5-209ENST00000635828 A0A0B4J269 797 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 RECQL4O94761 1208 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 MBD3O95983 291 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 SLC24A5Q71RS6 500 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 RPUSD2Q8IZ73 545 aaKnown RBP9.32□□□□□ -0.92
CDKL5-209ENST00000635828 C18orf25Q96B23 403 aaPredicted RBP9.32□□□□□ -0.92
CDKL5-209ENST00000635828 DUSP9Q99956 384 aaKnown RBP9.32□□□□□ -0.92
CDKL5-209ENST00000635828 FUCA2Q9BTY2 467 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 TRIM6Q9C030 488 aaPredicted RBP9.32□□□□□ -0.92
CDKL5-209ENST00000635828 GBP3Q9H0R5 595 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 SEL1LQ9UBV2 794 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 PARP2Q9UGN5 583 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 TNFSF13BQ9Y275 285 aa9.32□□□□□ -0.92
CDKL5-209ENST00000635828 TOM1L1O75674 476 aa9.31□□□□□ -0.92
CDKL5-209ENST00000635828 STAG3L1P0CL83 205 aa9.31□□□□□ -0.92
CDKL5-209ENST00000635828 SCNN1GP51170 649 aa9.31□□□□□ -0.92
CDKL5-209ENST00000635828 SOX4Q06945 474 aaPredicted RBP9.31□□□□□ -0.92
CDKL5-209ENST00000635828 ENOX2Q16206 610 aaKnown RBP9.31□□□□□ -0.92
CDKL5-209ENST00000635828 SLC10A6Q3KNW5 377 aa9.31□□□□□ -0.92
CDKL5-209ENST00000635828 ZCWPW2Q504Y3 356 aa9.31□□□□□ -0.92
CDKL5-209ENST00000635828 RASIP1Q5U651 963 aa9.31□□□□□ -0.92
CDKL5-209ENST00000635828 MPZL3Q6UWV2 235 aa9.31□□□□□ -0.92
CDKL5-209ENST00000635828 HERVK_113Q902F9 699 aa9.31□□□□□ -0.92
CDKL5-209ENST00000635828 ACCSQ96QU6 501 aa9.31□□□□□ -0.92
CDKL5-209ENST00000635828 MSTO1Q9BUK6 570 aa9.31□□□□□ -0.92
CDKL5-209ENST00000635828 LRRC27Q9C0I9 530 aa9.31□□□□□ -0.92
CDKL5-209ENST00000635828 PCDHB13Q9Y5F0 798 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms