RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	NXF3	Q9H4D5	531 aa	Known RBP	28.47	■■■□□ 2.15
UBE3A-222	ENST00000630907	HES2	Q9Y543	173 aa		28.47	■■■□□ 2.15
UBE3A-222	ENST00000630907	HOXA2	O43364	376 aa		28.46	■■■□□ 2.15
UBE3A-222	ENST00000630907	TLL1	O43897	1013 aa		28.46	■■■□□ 2.15
UBE3A-222	ENST00000630907	KIF20A	O95235	890 aa		28.46	■■■□□ 2.15
UBE3A-222	ENST00000630907	HARS	P12081	509 aa	Known RBP	28.46	■■■□□ 2.15
UBE3A-222	ENST00000630907	RABGGTB	P53611	331 aa		28.46	■■■□□ 2.15
UBE3A-222	ENST00000630907	NOLC1	Q14978	699 aa	Known RBP eCLIP	28.46	■■■□□ 2.15
UBE3A-222	ENST00000630907	LRIT3	Q3SXY7	679 aa		28.46	■■■□□ 2.15
UBE3A-222	ENST00000630907	ZNF658	Q5TYW1	1059 aa	Predicted RBP	28.46	■■■□□ 2.15
UBE3A-222	ENST00000630907	RAD9A	Q99638	391 aa		28.46	■■■□□ 2.15
UBE3A-222	ENST00000630907	APOL6	Q9BWW8	343 aa		28.46	■■■□□ 2.15
UBE3A-222	ENST00000630907	GBP3	Q9H0R5	595 aa		28.46	■■■□□ 2.15
UBE3A-222	ENST00000630907	STYXL1	Q9Y6J8	313 aa		28.46	■■■□□ 2.15
UBE3A-222	ENST00000630907	TISP43	B9A030	160 aa		28.45	■■■□□ 2.14
UBE3A-222	ENST00000630907	DGKI	O75912	1065 aa		28.45	■■■□□ 2.14
UBE3A-222	ENST00000630907	FGFR1	P11362	822 aa		28.45	■■■□□ 2.14
UBE3A-222	ENST00000630907	YME1L1	Q96TA2	773 aa		28.45	■■■□□ 2.14
UBE3A-222	ENST00000630907	HAPLN2	Q9GZV7	340 aa		28.45	■■■□□ 2.14
UBE3A-222	ENST00000630907	RNF39	Q9H2S5	420 aa		28.45	■■■□□ 2.14
UBE3A-222	ENST00000630907	UBN1	Q9NPG3	1134 aa		28.45	■■■□□ 2.14
UBE3A-222	ENST00000630907	INSL6	Q9Y581	213 aa		28.45	■■■□□ 2.14
UBE3A-222	ENST00000630907	PTPRS	Q13332	1948 aa		28.44	■■■□□ 2.14
UBE3A-222	ENST00000630907		A0A0B4J269	797 aa		28.44	■■■□□ 2.14
UBE3A-222	ENST00000630907	MEIS3P2	A8K0S8	358 aa		28.44	■■■□□ 2.14
UBE3A-222	ENST00000630907	HTRA4	P83105	476 aa	Predicted RBP	28.44	■■■□□ 2.14
UBE3A-222	ENST00000630907	KNOP1	Q1ED39	458 aa	Known RBP	28.44	■■■□□ 2.14
UBE3A-222	ENST00000630907	ISM2	Q6H9L7	571 aa		28.44	■■■□□ 2.14
UBE3A-222	ENST00000630907	AGMO	Q6ZNB7	445 aa		28.44	■■■□□ 2.14
UBE3A-222	ENST00000630907	RNF19A	Q9NV58	838 aa		28.44	■■■□□ 2.14
UBE3A-222	ENST00000630907	SNTG2	Q9NY99	539 aa		28.44	■■■□□ 2.14
UBE3A-222	ENST00000630907	PARP2	Q9UGN5	583 aa		28.44	■■■□□ 2.14
UBE3A-222	ENST00000630907	PCDHA11	Q9Y5I1	949 aa		28.44	■■■□□ 2.14
UBE3A-222	ENST00000630907	ZMYM2	Q9UBW7	1377 aa		28.44	■■■□□ 2.14
UBE3A-222	ENST00000630907	BIN1	O00499	593 aa		28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	GRM5	P41594	1212 aa		28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	GATM	P50440	423 aa		28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	THNSL1	Q8IYQ7	743 aa		28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	SMYD4	Q8IYR2	804 aa	Predicted RBP	28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	ABI1	Q8IZP0	508 aa		28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	GUF1	Q8N442	669 aa	Known RBP	28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	POMGNT1	Q8WZA1	660 aa		28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	ZNF689	Q96CS4	500 aa	Predicted RBP	28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	MSTO1	Q9BUK6	570 aa		28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	RSAD1	Q9HA92	442 aa		28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	MAPK8IP1	Q9UQF2	711 aa		28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	GIT1	Q9Y2X7	761 aa		28.43	■■■□□ 2.14
UBE3A-222	ENST00000630907	TGFB1I1	O43294	461 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	GART	P22102	1010 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	AKAP5	P24588	427 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	ADSS	P30520	456 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	SNRPF	P62306	86 aa	Known RBP	28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	SMAD3	P84022	425 aa	Known RBP	28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	MORC3	Q14149	939 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	RAB30	Q15771	203 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	CLLU1OS	Q5K130	101 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	GLB1L	Q6UWU2	654 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	HS2ST1	Q7LGA3	356 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	CEP120	Q8N960	986 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	HELQ	Q8TDG4	1101 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	CCDC94	Q9BW85	323 aa	Predicted RBP	28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	PBX4	Q9BYU1	374 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	TMEM117	Q9H0C3	514 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	RC3H2	Q9HBD1	1191 aa	Known RBP	28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	MSRA	Q9UJ68	235 aa		28.42	■■■□□ 2.14
UBE3A-222	ENST00000630907	TBKBP1	A7MCY6	615 aa		28.41	■■■□□ 2.14
UBE3A-222	ENST00000630907	OGT	O15294	1046 aa		28.41	■■■□□ 2.14
UBE3A-222	ENST00000630907	OFD1	O75665	1012 aa		28.41	■■■□□ 2.14
UBE3A-222	ENST00000630907	OSTN	P61366	133 aa		28.41	■■■□□ 2.14
UBE3A-222	ENST00000630907	KYAT1	Q16773	422 aa		28.41	■■■□□ 2.14
UBE3A-222	ENST00000630907	TRIML1	Q8N9V2	468 aa		28.41	■■■□□ 2.14
UBE3A-222	ENST00000630907	CGN	Q9P2M7	1197 aa	Known RBP	28.41	■■■□□ 2.14
UBE3A-222	ENST00000630907	AGO2	Q9UKV8	859 aa	Known RBP	28.41	■■■□□ 2.14
UBE3A-222	ENST00000630907	PBX2	P40425	430 aa		28.4	■■■□□ 2.14
UBE3A-222	ENST00000630907	COBLL1	Q53SF7	1204 aa		28.4	■■■□□ 2.14
UBE3A-222	ENST00000630907	CCDC183	Q5T5S1	534 aa		28.4	■■■□□ 2.14
UBE3A-222	ENST00000630907	ARMCX5	Q6P1M9	558 aa		28.4	■■■□□ 2.14
UBE3A-222	ENST00000630907	CMTR2	Q8IYT2	770 aa	Known RBP	28.4	■■■□□ 2.14
UBE3A-222	ENST00000630907	GOLGA5	Q8TBA6	731 aa		28.4	■■■□□ 2.14
UBE3A-222	ENST00000630907	RSPH1	Q8WYR4	309 aa		28.4	■■■□□ 2.14
UBE3A-222	ENST00000630907	CASD1	Q96PB1	797 aa		28.4	■■■□□ 2.14
UBE3A-222	ENST00000630907	KCTD10	Q9H3F6	313 aa		28.4	■■■□□ 2.14
UBE3A-222	ENST00000630907	AGPAT3	Q9NRZ7	376 aa		28.4	■■■□□ 2.14
UBE3A-222	ENST00000630907	TRIOBP	Q9H2D6	2365 aa		28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	RECQL4	O94761	1208 aa		28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	MYOG	P15173	224 aa		28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	PRCP	P42785	496 aa		28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	YARS	P54577	528 aa	Known RBP	28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	BTG3	Q14201	252 aa	Predicted RBP	28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	PAN2	Q504Q3	1202 aa	Known RBP	28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	SEZ6	Q53EL9	994 aa		28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	TMEM192	Q8IY95	271 aa		28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	SP7	Q8TDD2	431 aa	Predicted RBP	28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	ACAP3	Q96P50	834 aa		28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	GAD1	Q99259	594 aa		28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	CBWD1	Q9BRT8	395 aa		28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	TYW1	Q9NV66	732 aa	Known RBP	28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	KLK14	Q9P0G3	267 aa		28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	INPP5F	Q9Y2H2	1132 aa		28.39	■■■□□ 2.14
UBE3A-222	ENST00000630907	RANBP2	P49792	3224 aa	Known RBP	28.38	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms