RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 TRPM5Q9NZQ8 1165 aa4.9□□□□□ -1.63
CHD2-219ENST00000630016 B4GALT6Q9UBX8 382 aa4.9□□□□□ -1.63
CHD2-219ENST00000630016 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.9□□□□□ -1.63
CHD2-219ENST00000630016 CLCA2Q9UQC9 943 aa4.9□□□□□ -1.63
CHD2-219ENST00000630016 AGLP35573 1532 aa4.9□□□□□ -1.63
CHD2-219ENST00000630016 REREQ9P2R6 1566 aa4.9□□□□□ -1.63
CHD2-219ENST00000630016 SCAPERQ9BY12 1400 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 RICTORQ6R327 1708 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 AHRRA9YTQ3 701 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 RNASET2O00584 256 aaKnown RBP4.89□□□□□ -1.63
CHD2-219ENST00000630016 LPXNO60711 386 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 APOBEC3AP31941 199 aaPredicted RBP4.89□□□□□ -1.63
CHD2-219ENST00000630016 ZEB1P37275 1124 aaPredicted RBP4.89□□□□□ -1.63
CHD2-219ENST00000630016 FNDC3BQ53EP0 1204 aaKnown RBP4.89□□□□□ -1.63
CHD2-219ENST00000630016 DOK3Q7L591 496 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 RD3Q7Z3Z2 195 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 GDF7Q7Z4P5 450 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 NTN5Q8WTR8 489 aaPredicted RBP4.89□□□□□ -1.63
CHD2-219ENST00000630016 MKL1Q969V6 931 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 ELF4Q99607 663 aaPredicted RBP4.89□□□□□ -1.63
CHD2-219ENST00000630016 SOX7Q9BT81 388 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 CPEB1Q9BZB8 566 aaKnown RBP4.89□□□□□ -1.63
CHD2-219ENST00000630016 SYNPO2LQ9H987 977 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 TOMM22Q9NS69 142 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 SPO11Q9Y5K1 396 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 CTTNBP2Q8WZ74 1663 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 NCOA1Q15788 1441 aa4.89□□□□□ -1.63
CHD2-219ENST00000630016 STRCQ7RTU9 1775 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 PLA2R1Q13018 1463 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 ZNF518AQ6AHZ1 1483 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 ST20-MTHFSA0A0A6YYL1 179 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 GAGE12BA1L429 117 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 GAGE12HA6NDE8 117 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 CASRP41180 1078 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 ERCC6LQ2NKX8 1250 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 UNQ6494/PRO21346Q6UXR6 183 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 UBE2R2Q712K3 238 aaPredicted RBP4.88□□□□□ -1.63
CHD2-219ENST00000630016 ARHGEF19Q8IW93 802 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 CDYL2Q8N8U2 506 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 PIK3C3Q8NEB9 887 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 PPP1R14CQ8TAE6 165 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 WDR11Q9BZH6 1224 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 ANKFY1Q9P2R3 1169 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 PCDHB6Q9Y5E3 794 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 MLH3Q9UHC1 1453 aa4.88□□□□□ -1.63
CHD2-219ENST00000630016 RAPGEF6Q8TEU7 1601 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 FER1L4A9Z1Z3 1794 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 TMEM200CA6NKL6 621 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 PRR5-ARHGAP8B1AHC4 643 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 CBX4O00257 560 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 NCR1O76036 304 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 PCDH8O95206 1070 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 CFBP00751 764 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 HSP90B1P14625 803 aaKnown RBP4.87□□□□□ -1.63
CHD2-219ENST00000630016 ZNF37AP17032 561 aaPredicted RBP4.87□□□□□ -1.63
CHD2-219ENST00000630016 GZMKP49863 264 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 DUSP2Q05923 314 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 MRPL49Q13405 166 aaKnown RBP4.87□□□□□ -1.63
CHD2-219ENST00000630016 ZNF460Q14592 562 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 PLXDC1Q8IUK5 500 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 RTF1Q92541 710 aaKnown RBP4.87□□□□□ -1.63
CHD2-219ENST00000630016 CAVIN3Q969G5 261 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 LSM14BQ9BX40 385 aaKnown RBP4.87□□□□□ -1.63
CHD2-219ENST00000630016 AKIP1Q9NQ31 210 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 COX11Q9Y6N1 276 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 PTPRKQ15262 1439 aa4.87□□□□□ -1.63
CHD2-219ENST00000630016 HECW1Q76N89 1606 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 DIRC3C9JPN6 131 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 DNAJC8O75937 253 aaPredicted RBP4.86□□□□□ -1.63
CHD2-219ENST00000630016 JMJD7P0C870 316 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 SPATA31D3P0C874 917 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 CDK4P11802 303 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 XPAP23025 273 aaPredicted RBP4.86□□□□□ -1.63
CHD2-219ENST00000630016 CD40P25942 277 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 FAM189BP81408 668 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 SOGA3Q5TF21 947 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 CCDC62Q6P9F0 684 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 SPATA31D4Q6ZUB0 917 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 CMTR2Q8IYT2 770 aaKnown RBP4.86□□□□□ -1.63
CHD2-219ENST00000630016 LILRA3Q8N6C8 439 aaPredicted RBP4.86□□□□□ -1.63
CHD2-219ENST00000630016 NELL1Q92832 810 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 FERMT2Q96AC1 680 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 COQ10AQ96MF6 247 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 CLUHP3Q96NS8 147 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 ZKSCAN5Q9Y2L8 839 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 INSL6Q9Y581 213 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 SPATA31A6Q5VVP1 1343 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 MYPNQ86TC9 1320 aa4.86□□□□□ -1.63
CHD2-219ENST00000630016 NUP153P49790 1475 aaKnown RBP4.86□□□□□ -1.63
CHD2-219ENST00000630016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.86□□□□□ -1.63
CHD2-219ENST00000630016 NRP2O60462 931 aa4.85□□□□□ -1.63
CHD2-219ENST00000630016 NDUFA10O95299 355 aa4.85□□□□□ -1.63
CHD2-219ENST00000630016 LY86O95711 162 aa4.85□□□□□ -1.63
CHD2-219ENST00000630016 HKR1P10072 659 aa4.85□□□□□ -1.63
CHD2-219ENST00000630016 BMPR1AP36894 532 aa4.85□□□□□ -1.63
CHD2-219ENST00000630016 CLK3P49761 638 aaKnown RBP4.85□□□□□ -1.63
CHD2-219ENST00000630016 GUCY1B3Q02153 619 aa4.85□□□□□ -1.63
CHD2-219ENST00000630016 CD69Q07108 199 aa4.85□□□□□ -1.63
CHD2-219ENST00000630016 RBL2Q08999 1139 aa4.85□□□□□ -1.63
CHD2-219ENST00000630016 COLEC12Q5KU26 742 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms