RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 CEP68Q76N32 757 aa13.39□□□□□ -0.27
CHD2-218ENST00000629346 MB21D2Q8IYB1 491 aaPredicted RBP13.39□□□□□ -0.27
CHD2-218ENST00000629346 FAM160A2Q8N612 972 aaPredicted RBP13.39□□□□□ -0.27
CHD2-218ENST00000629346 RABGGTAQ92696 567 aa13.39□□□□□ -0.27
CHD2-218ENST00000629346 MAP4K1Q92918 833 aa13.39□□□□□ -0.27
CHD2-218ENST00000629346 MCRS1Q96EZ8 462 aa13.39□□□□□ -0.27
CHD2-218ENST00000629346 DISC1Q9NRI5 854 aa13.39□□□□□ -0.27
CHD2-218ENST00000629346 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.39□□□□□ -0.27
CHD2-218ENST00000629346 HCFC1R1Q9NWW0 138 aa13.39□□□□□ -0.27
CHD2-218ENST00000629346 FNIP2Q9P278 1114 aa13.39□□□□□ -0.27
CHD2-218ENST00000629346 SUCLA2Q9P2R7 463 aaPredicted RBP13.39□□□□□ -0.27
CHD2-218ENST00000629346 IGF2RP11717 2491 aa13.39□□□□□ -0.27
CHD2-218ENST00000629346 WDR64B1ANS9 1081 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 AXIN1O15169 862 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 CHMP2AO43633 222 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 NR1I2O75469 434 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 C1RP00736 705 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 C8AP07357 584 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 CXCL12P48061 93 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 LIMK1P53667 647 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 STPG1Q5TH74 334 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 PSAPL1Q6NUJ1 521 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 FUT10Q6P4F1 479 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 TMTC3Q6ZXV5 915 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 ZNF410Q86VK4 478 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 NPAS3Q8IXF0 933 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 ZNF687Q8N1G0 1237 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 KDF1Q8NAX2 398 aaPredicted RBP13.38□□□□□ -0.27
CHD2-218ENST00000629346 GAD1Q99259 594 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 COLEC11Q9BWP8 271 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 ARRDC1-AS1Q9H2J1 176 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 RNF39Q9H2S5 420 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 AGPAT5Q9NUQ2 364 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 MIOSQ9NXC5 875 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 SEPT9Q9UHD8 586 aaPredicted RBP13.38□□□□□ -0.27
CHD2-218ENST00000629346 FBXW11Q9UKB1 542 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 LHX6Q9UPM6 363 aa13.38□□□□□ -0.27
CHD2-218ENST00000629346 NBEAQ8NFP9 2946 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 ARL5CA6NH57 179 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 PRC1O43663 620 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 XYLBO75191 536 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 HNRNPA1P09651 372 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHD2-218ENST00000629346 CALM1P0DP23 149 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 CALM2P0DP24 149 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 CALM3P0DP25 149 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 ITGA4P13612 1032 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 SCNN1GP51170 649 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 RING1Q06587 406 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 FOXC1Q12948 553 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 AP3B2Q13367 1082 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 GRM2Q14416 872 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 TARBP2Q15633 366 aaKnown RBP13.37□□□□□ -0.27
CHD2-218ENST00000629346 PRR16Q569H4 304 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 UBXN11Q5T124 520 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 TANGO2Q6ICL3 276 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 ZFP42Q96MM3 310 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 MBOAT7Q96N66 472 aa13.37□□□□□ -0.27
CHD2-218ENST00000629346 GCN1Q92616 2671 aaKnown RBP13.37□□□□□ -0.27
CHD2-218ENST00000629346 SRRM3A6NNA2 597 aaPredicted RBP13.36□□□□□ -0.27
CHD2-218ENST00000629346 MAN2B1O00754 1011 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 ECI2O75521 394 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 ZIC2O95409 532 aaPredicted RBP13.36□□□□□ -0.27
CHD2-218ENST00000629346 MLH1P40692 756 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 CLK2P49760 499 aaKnown RBP13.36□□□□□ -0.27
CHD2-218ENST00000629346 CREMQ03060 361 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 DSC1Q08554 894 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 PABPC1LQ4VXU2 614 aaKnown RBP13.36□□□□□ -0.27
CHD2-218ENST00000629346 RTP2Q5QGT7 225 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 MAMSTRQ6ZN01 415 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 SMG8Q8ND04 991 aaKnown RBP13.36□□□□□ -0.27
CHD2-218ENST00000629346 FAM3CQ92520 227 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 APOL6Q9BWW8 343 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 BRD9Q9H8M2 597 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 IFT122Q9HBG6 1241 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 DNMT3BQ9UBC3 853 aaKnown RBP13.36□□□□□ -0.27
CHD2-218ENST00000629346 MRPS23Q9Y3D9 190 aaKnown RBP13.36□□□□□ -0.27
CHD2-218ENST00000629346 HES2Q9Y543 173 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 SLC12A7Q9Y666 1083 aa13.36□□□□□ -0.27
CHD2-218ENST00000629346 DSPP15924 2871 aaKnown RBP13.36□□□□□ -0.27
CHD2-218ENST00000629346 SH2B2O14492 632 aaPredicted RBP13.35□□□□□ -0.27
CHD2-218ENST00000629346 TADA2AO75478 443 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 CYP3A4P08684 503 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 SRGAP2CP0DJJ0 459 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 HOXA11P31270 313 aaPredicted RBP13.35□□□□□ -0.27
CHD2-218ENST00000629346 HOXC13P31276 330 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 CNR2P34972 360 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 SETQ01105 290 aaPredicted RBP13.35□□□□□ -0.27
CHD2-218ENST00000629346 GAS6Q14393 721 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 PPP1R18Q6NYC8 613 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 LONP2Q86WA8 852 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 MICU3Q86XE3 530 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 CEP57Q86XR8 500 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 TMTC2Q8N394 836 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 SLC7A14Q8TBB6 771 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 RUFY2Q8WXA3 655 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 LSM14BQ9BX40 385 aaKnown RBP13.35□□□□□ -0.27
CHD2-218ENST00000629346 SMOC1Q9H4F8 434 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 MINDY3Q9H8M7 445 aa13.35□□□□□ -0.27
CHD2-218ENST00000629346 UBN1Q9NPG3 1134 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms