RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 BADQ92934 168 aa10.79□□□□□ -0.68
SOX2-OT-249ENST00000628810 ZDHHC16Q969W1 377 aa10.79□□□□□ -0.68
SOX2-OT-249ENST00000628810 FUCA2Q9BTY2 467 aa10.79□□□□□ -0.68
SOX2-OT-249ENST00000628810 SLC4A5Q9BY07 1137 aa10.79□□□□□ -0.68
SOX2-OT-249ENST00000628810 GBP3Q9H0R5 595 aa10.79□□□□□ -0.68
SOX2-OT-249ENST00000628810 PDZD7Q9H5P4 517 aa10.79□□□□□ -0.68
SOX2-OT-249ENST00000628810 TYW1Q9NV66 732 aaKnown RBP10.79□□□□□ -0.68
SOX2-OT-249ENST00000628810 CGNQ9P2M7 1197 aaKnown RBP10.79□□□□□ -0.68
SOX2-OT-249ENST00000628810 ZMYND8Q9ULU4 1186 aaPredicted RBP10.79□□□□□ -0.68
SOX2-OT-249ENST00000628810 TRAF3IP3Q9Y228 551 aa10.79□□□□□ -0.68
SOX2-OT-249ENST00000628810 PIN4Q9Y237 131 aaKnown RBP10.79□□□□□ -0.68
SOX2-OT-249ENST00000628810 PDXKO00764 312 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 MGEA5O60502 916 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 BAIAP3O94812 1187 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 SYN1P17600 705 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 ADSSP30520 456 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 LIG4P49917 911 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 NCBP1Q09161 790 aaKnown RBP10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 NFX1Q12986 1120 aaKnown RBP10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 CAMK2BQ13554 666 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 STX1AQ16623 288 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 TCTN1Q2MV58 587 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 DPCR1Q3MIW9 517 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 DCAF4L1Q3SXM0 396 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 UBXN11Q5T124 520 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 CENPPQ6IPU0 288 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 SLC27A1Q6PCB7 646 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 PSRC1Q6PGN9 363 aaPredicted RBP10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 MPZL3Q6UWV2 235 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 ZC3H3Q8IXZ2 948 aaKnown RBP10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 GOLGA5Q8TBA6 731 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 DHTKD1Q96HY7 919 aaPredicted RBP10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 CPB2Q96IY4 423 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 TARS2Q9BW92 718 aaKnown RBP10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 RGS18Q9NS28 235 aa10.78□□□□□ -0.68
SOX2-OT-249ENST00000628810 MICAL3Q7RTP6 2002 aa10.77□□□□□ -0.68
SOX2-OT-249ENST00000628810 COL4A6Q14031 1691 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 A0A0B4J269 797 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 ABHD14A-ACY1A0A1B0GW23 586 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 SYCE3A1L190 88 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 ANKRD63C9JTQ0 380 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 PSMA7O14818 248 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 KIAA0391O15091 583 aaKnown RBP10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 FAM189A1O60320 539 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 EFCAB14O75071 495 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 MCF2P10911 925 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 GARTP22102 1010 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 RAB27AP51159 221 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 LRRC63Q05C16 580 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 TYRO3Q06418 890 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 STIM1Q13586 685 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 MYBPC2Q14324 1141 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 NOLC1Q14978 699 aaKnown RBP eCLIP10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 EDRF1Q3B7T1 1238 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 ZNF568Q3ZCX4 644 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 EEF1DP3Q658K8 133 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 ISM2Q6H9L7 571 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 SLFN12LQ6IEE8 588 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 SASS6Q6UVJ0 657 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 C16orf59Q7L2K0 433 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 HS2ST1Q7LGA3 356 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 APBB1IPQ7Z5R6 666 aaPredicted RBP10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 DEFB128Q7Z7B8 93 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 SLC9A9Q8IVB4 645 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 NELFCDQ8IXH7 590 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 CRIPAKQ8N1N5 446 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 P2RX5Q93086 422 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 BICD1Q96G01 975 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 HAPLN2Q9GZV7 340 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 CDT1Q9H211 546 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 IKZF4Q9H2S9 585 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 SEMA6BQ9H3T3 888 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 AGPAT3Q9NRZ7 376 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 C1orf112Q9NSG2 853 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 ANO10Q9NW15 660 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 HCSTQ9UBK5 93 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 DACH1Q9UI36 760 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 MAPK8IP1Q9UQF2 711 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 USP20Q9Y2K6 914 aa10.77□□□□□ -0.69
SOX2-OT-249ENST00000628810 RALGAPA2Q2PPJ7 1873 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 A0A0U1RQF3 1178 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 TISP43B9A030 160 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 C9IYK1 514 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 CLDN3O15551 220 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 CALUO43852 315 aaPredicted RBP10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 ZNF623O75123 536 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 CCDC192P0DO97 292 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 SKIP12755 728 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 ZSCAN20P17040 1043 aaPredicted RBP10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 CCNE1P24864 410 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 ERCC5P28715 1186 aaPredicted RBP10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 EPHB4P54760 987 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 FAM189BP81408 668 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 POU5F1Q01860 360 aaKnown RBP10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 PAK1Q13153 545 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 IKBKEQ14164 716 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 TMEM240Q5SV17 173 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 RASIP1Q5U651 963 aa10.76□□□□□ -0.69
SOX2-OT-249ENST00000628810 TWF2Q6IBS0 349 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms