RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 BTBD19C9JJ37 291 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 LGR5O75473 907 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 TXNP10599 105 aaKnown RBP21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 FBXL13Q8NEE6 735 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 HELQQ8TDG4 1101 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 PRPF31Q8WWY3 499 aaKnown RBP21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 ARFGAP3Q9NP61 516 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 ACP6Q9NPH0 428 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 RAB20Q9NX57 234 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 AGO2Q9UKV8 859 aaKnown RBP21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 STYXL1Q9Y6J8 313 aa21.24■□□□□ 0.99
CHRNA4-209ENST00000627000 TTLL13PA6NNM8 815 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 ZBTB42B2RXF5 422 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 SASH3O75995 380 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 TBC1D8O95759 1140 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 ABCB4P21439 1286 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 ABCD1P33897 745 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 GPC3P51654 580 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 MKRN4PQ13434 485 aaPredicted RBP21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 ZBTB41Q5SVQ8 909 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 CRELD2Q6UXH1 353 aaPredicted RBP21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 FMNL3Q8IVF7 1028 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 LRRC57Q8N9N7 239 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 GPRC5AQ8NFJ5 357 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 TPCN2Q8NHX9 752 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 PSPC1Q8WXF1 523 aaKnown RBP21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 PI4K2AQ9BTU6 479 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 SUGCTQ9HAC7 445 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 TSKSQ9UJT2 592 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 INTUQ9ULD6 942 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 ATP8B3O60423 1300 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 CCL15-CCL14A0A0B4J2E2 113 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 SGPL1O95470 568 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 PLCB4Q15147 1175 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 CCL15Q16663 113 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 GJC2Q5T442 439 aaPredicted RBP21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 ARMCX2Q7L311 632 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 ZNF572Q7Z3I7 529 aaPredicted RBP21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 LRRC71Q8N4P6 559 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 TRAPPC12Q8WVT3 735 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 BBXQ8WY36 941 aaPredicted RBP21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 KCNN1Q92952 543 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 TATDN2Q93075 761 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 ANKFY1Q9P2R3 1169 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 PLXNA1Q9UIW2 1896 aa21.23■□□□□ 0.99
CHRNA4-209ENST00000627000 PIGRP01833 764 aa21.22■□□□□ 0.99
CHRNA4-209ENST00000627000 GTF2H1P32780 548 aa21.22■□□□□ 0.99
CHRNA4-209ENST00000627000 CCDC181Q5TID7 509 aa21.22■□□□□ 0.99
CHRNA4-209ENST00000627000 SPATA4Q8NEY3 305 aa21.22■□□□□ 0.99
CHRNA4-209ENST00000627000 BRI3BPQ8WY22 251 aa21.22■□□□□ 0.99
CHRNA4-209ENST00000627000 FAM167AQ96KS9 214 aa21.22■□□□□ 0.99
CHRNA4-209ENST00000627000 OSGEPQ9NPF4 335 aa21.22■□□□□ 0.99
CHRNA4-209ENST00000627000 PLXNB2O15031 1838 aa21.22■□□□□ 0.99
CHRNA4-209ENST00000627000 CYP26A1O43174 497 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 ADCY3O60266 1144 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 MATR3P43243 847 aaKnown RBP eCLIP21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 PRPF4BQ13523 1007 aaKnown RBP21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 LONRF2Q1L5Z9 754 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 USP37Q86T82 979 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 FAM71AQ8IYT1 594 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 ATP8B4Q8TF62 1192 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 VTI1AQ96AJ9 217 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 ZBTB10Q96DT7 871 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 NT5C1BQ96P26 610 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 PDE11AQ9HCR9 933 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 ABCB6Q9NP58 842 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 PTPRJQ12913 1337 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 A0A0A6YYK5 440 aaPredicted RBP21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 CETPP11597 493 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 MFAP3P55082 362 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 PSMD6Q15008 389 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 SEZ6Q53EL9 994 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 PLPPR4Q7Z2D5 763 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 RPUSD2Q8IZ73 545 aaKnown RBP21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 SHC3Q92529 594 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 DHX38Q92620 1227 aaKnown RBP21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 ARHGEF26Q96DR7 871 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 TMEM134Q9H6X4 195 aa21.21■□□□□ 0.99
CHRNA4-209ENST00000627000 ADORA2AP29274 412 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 TTLL4Q14679 1199 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 IFI16Q16666 785 aaKnown RBP21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 BEND6Q5SZJ8 279 aaPredicted RBP21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 TAF3Q5VWG9 929 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 C15orf39Q6ZRI6 1047 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 NOP9Q86U38 636 aaKnown RBP21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 SLC47A2Q86VL8 602 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 THAP2Q9H0W7 228 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 KIAA1586Q9HCI6 787 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 ASB14A6NK59 587 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 TMEM253P0C7T8 217 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 SRGAP2CP0DJJ0 459 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 HARSP12081 509 aaKnown RBP21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 CHRNB2P17787 502 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 DMTNQ08495 405 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 ZNF792Q3KQV3 632 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 EPS8L1Q8TE68 723 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 ZNF668Q96K58 619 aaPredicted RBP21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 PCDHB18PQ96TA0 734 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 MSTO1Q9BUK6 570 aa21.2■□□□□ 0.98
CHRNA4-209ENST00000627000 NOCTQ9UK39 431 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms