RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 FBF1Q8TES7 1133 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 PARD3BQ8TEW8 1205 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 FBXO41Q8TF61 875 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 RPGRQ92834 1020 aaKnown RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 RBM17Q96I25 401 aaKnown RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 RPS6KC1Q96S38 1066 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 YIPF3Q9GZM5 350 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 LRMDAQ9H2I8 198 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 VCXQ9H320 206 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 SEMA4AQ9H3S1 761 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 SIX2Q9NPC8 291 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 PAPOLBQ9NRJ5 636 aaKnown RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 CTTNBP2NLQ9P2B4 639 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 ABCF2Q9UG63 623 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 HDAC9Q9UKV0 1011 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 SNX24Q9Y343 169 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 PFASO15067 1338 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 DOCK1Q14185 1865 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 ANKRD62A6NC57 917 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 ENO4A6NNW6 628 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 TCP11X1B4DZS4 312 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 PDXKO00764 312 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 SLC16A3O15427 465 aaKnown RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 CALUO43852 315 aaPredicted RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 EDIL3O43854 480 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 GSTA2P09210 222 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 VCAM1P19320 739 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 SLC9A1P19634 815 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 PRDX5P30044 214 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 ALDH3A1P30838 453 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 CTCFP49711 727 aaPredicted RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 GPSM2P81274 684 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 KLC1Q07866 573 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 DYNC1I2Q13409 638 aaKnown RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 HIC1Q14526 733 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 LRRC41Q15345 812 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 BMT2Q1RMZ1 405 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 THEMIS2Q5TEJ8 643 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 DCAF12L1Q5VU92 463 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 NUGGCQ68CJ6 796 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 RGS9BPQ6ZS82 235 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 ARHGEF18Q6ZSZ5 1173 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 SESTD1Q86VW0 696 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 RHOT2Q8IXI1 618 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 RIBC1Q8N443 379 aaPredicted RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 KCTD17Q8N5Z5 321 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 C12orf50Q8NA57 414 aaPredicted RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 RBBP8NLQ8NC74 664 aaPredicted RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 FLAD1Q8NFF5 587 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 OLIG1Q8TAK6 271 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 LNX1Q8TBB1 728 aaPredicted RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 SLC35G2Q8TBE7 412 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 RBM46Q8TBY0 533 aaKnown RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 SNX29Q8TEQ0 813 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 PIGOQ8TEQ8 1089 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 SCFD1Q8WVM8 642 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 C7orf43Q8WVR3 580 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 TEKT4Q8WW24 435 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 DYDC1Q8WWB3 177 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 PRCCQ92733 491 aaPredicted RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 SLCO2A1Q92959 643 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 ZBTB10Q96DT7 871 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 DTNBP1Q96EV8 351 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 SYT11Q9BT88 431 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 TUBB6Q9BUF5 446 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 CCDC28BQ9BUN5 200 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 RTFDC1Q9BY42 306 aaPredicted RBP4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 RIOX1Q9H6W3 641 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 TLE6Q9H808 572 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 TFCP2L1Q9NZI6 479 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 WHRNQ9P202 907 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 WDR35Q9P2L0 1181 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 LGALS13Q9UHV8 139 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 USP20Q9Y2K6 914 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 SUGT1Q9Y2Z0 365 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 STARD13Q9Y3M8 1113 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 NR2E1Q9Y466 385 aa4.48□□□□□ -1.69
PTP4A1-205ENST00000626021 MYO3BQ8WXR4 1341 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 PAPPA2Q9BXP8 1791 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 A8MUI8 341 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 KLRF2D3W0D1 207 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 MAPK13O15264 365 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 SMIM24O75264 130 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 MTA2O94776 668 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 LDHBP07195 334 aaKnown RBP4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 LDHCP07864 332 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 GNAT1P11488 350 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 COILP38432 576 aaPredicted RBP4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 PEX19P40855 299 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 RPL21P46778 160 aaKnown RBP4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 POLGP54098 1239 aaPredicted RBP4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 CAV1Q03135 178 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 ARID5AQ03989 594 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 STRN3Q13033 797 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 TSNAXIP1Q2TAA8 658 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 ZNF772Q68DY9 489 aaPredicted RBP4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 C11orf63Q6NUN7 778 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 RHBDF2Q6PJF5 856 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 PPP1R21Q6ZMI0 780 aa4.47□□□□□ -1.69
PTP4A1-205ENST00000626021 SYDE1Q6ZW31 735 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms