RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 EVI5O60447 810 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 CXCL10P02778 98 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 ACOT2P49753 483 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 OSTNP61366 133 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 MYL5Q02045 173 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 MCL1Q07820 350 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 ADAM9Q13443 819 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 DSC3Q14574 896 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 NOLC1Q14978 699 aaKnown RBP eCLIP18.14■□□□□ 0.49
CCNA1-203ENST00000625767 NOTUMQ6P988 496 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 IRF2BP1Q8IU81 584 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 ZC3H3Q8IXZ2 948 aaKnown RBP18.14■□□□□ 0.49
CCNA1-203ENST00000625767 USP38Q8NB14 1042 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 DPF3Q92784 378 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 HTATIP2Q9BUP3 242 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 NAT10Q9H0A0 1025 aaKnown RBP18.14■□□□□ 0.49
CCNA1-203ENST00000625767 FANCLQ9NW38 375 aa18.14■□□□□ 0.49
CCNA1-203ENST00000625767 AGO2Q9UKV8 859 aaKnown RBP18.14■□□□□ 0.49
CCNA1-203ENST00000625767 BICDL2A1A5D9 508 aa18.13■□□□□ 0.49
CCNA1-203ENST00000625767 AKAP3O75969 853 aa18.13■□□□□ 0.49
CCNA1-203ENST00000625767 EDRF1Q3B7T1 1238 aa18.13■□□□□ 0.49
CCNA1-203ENST00000625767 SPATA1Q5VX52 437 aa18.13■□□□□ 0.49
CCNA1-203ENST00000625767 CEP135Q66GS9 1140 aa18.13■□□□□ 0.49
CCNA1-203ENST00000625767 TWF2Q6IBS0 349 aaKnown RBP18.13■□□□□ 0.49
CCNA1-203ENST00000625767 MFSD5Q6N075 450 aa18.13■□□□□ 0.49
CCNA1-203ENST00000625767 CRELD2Q6UXH1 353 aaPredicted RBP18.13■□□□□ 0.49
CCNA1-203ENST00000625767 THNSL1Q8IYQ7 743 aa18.13■□□□□ 0.49
CCNA1-203ENST00000625767 BADQ92934 168 aa18.13■□□□□ 0.49
CCNA1-203ENST00000625767 ADAM2Q99965 735 aa18.13■□□□□ 0.49
CCNA1-203ENST00000625767 MSTO1Q9BUK6 570 aa18.13■□□□□ 0.49
CCNA1-203ENST00000625767 NXF3Q9H4D5 531 aaKnown RBP18.13■□□□□ 0.49
CCNA1-203ENST00000625767 PTPRSQ13332 1948 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 MEIS3P2A8K0S8 358 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 N4BP3O15049 544 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 MEFVO15553 781 aaPredicted RBP18.12■□□□□ 0.49
CCNA1-203ENST00000625767 ADRB2P07550 413 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 ACRP10323 421 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 GARTP22102 1010 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 WNT7BP56706 349 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 PCBP1Q15365 356 aaKnown RBP eCLIP18.12■□□□□ 0.49
CCNA1-203ENST00000625767 CT47A1Q5JQC4 288 aaPredicted RBP18.12■□□□□ 0.49
CCNA1-203ENST00000625767 SLC27A1Q6PCB7 646 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 CBWD2Q8IUF1 395 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 C12orf56Q8IXR9 622 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 FAM84AQ96KN4 292 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 FAM213AQ9BRX8 229 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 CXCL16Q9H2A7 254 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 RNF39Q9H2S5 420 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 EXOC3O60645 756 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 ATP1A3P13637 1013 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 AXLP30530 894 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 FKBP3Q00688 224 aaKnown RBP18.12■□□□□ 0.49
CCNA1-203ENST00000625767 NFIL3Q16649 462 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 TPD52L1Q16890 204 aaPredicted RBP18.12■□□□□ 0.49
CCNA1-203ENST00000625767 XXYLT1Q8NBI6 393 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 SMG8Q8ND04 991 aaKnown RBP18.12■□□□□ 0.49
CCNA1-203ENST00000625767 GOLGA5Q8TBA6 731 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 RNF19AQ9NV58 838 aa18.12■□□□□ 0.49
CCNA1-203ENST00000625767 IKBKBO14920 756 aa18.11■□□□□ 0.49
CCNA1-203ENST00000625767 EPHB4P54760 987 aa18.11■□□□□ 0.49
CCNA1-203ENST00000625767 NCBP1Q09161 790 aaKnown RBP18.11■□□□□ 0.49
CCNA1-203ENST00000625767 SLFN12LQ6IEE8 588 aa18.11■□□□□ 0.49
CCNA1-203ENST00000625767 SLC9A9Q8IVB4 645 aa18.11■□□□□ 0.49
CCNA1-203ENST00000625767 ANP32EQ9BTT0 268 aa18.11■□□□□ 0.49
CCNA1-203ENST00000625767 APOL6Q9BWW8 343 aa18.11■□□□□ 0.49
CCNA1-203ENST00000625767 PRKAG2Q9UGJ0 569 aa18.11■□□□□ 0.49
CCNA1-203ENST00000625767 TULP1O00294 542 aaPredicted RBP18.1■□□□□ 0.49
CCNA1-203ENST00000625767 CETN3O15182 167 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 OGTO15294 1046 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 MCF2P10911 925 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 ZSCAN20P17040 1043 aaPredicted RBP18.1■□□□□ 0.49
CCNA1-203ENST00000625767 SNRPFP62306 86 aaKnown RBP18.1■□□□□ 0.49
CCNA1-203ENST00000625767 C16orf59Q7L2K0 433 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 GPD1LQ8N335 351 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 TMEM130Q8N3G9 435 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 PLEKHO2Q8TD55 490 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 SEPT8Q92599 483 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 LPPQ93052 612 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 ADPGKQ9BRR6 497 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 FAM105AQ9NUU6 356 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 SNTG2Q9NY99 539 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 CGNQ9P2M7 1197 aaKnown RBP18.1■□□□□ 0.49
CCNA1-203ENST00000625767 IPPQ9Y573 584 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 PCDHB2Q9Y5E7 798 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 PDCD11Q14690 1871 aaKnown RBP18.1■□□□□ 0.49
CCNA1-203ENST00000625767 RALGAPA2Q2PPJ7 1873 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 TTC3P53804 2025 aa18.1■□□□□ 0.49
CCNA1-203ENST00000625767 BECN2A8MW95 431 aa18.09■□□□□ 0.49
CCNA1-203ENST00000625767 EXTL3O43909 919 aa18.09■□□□□ 0.49
CCNA1-203ENST00000625767 STAG3L1P0CL83 205 aa18.09■□□□□ 0.49
CCNA1-203ENST00000625767 ATF7P17544 494 aaPredicted RBP18.09■□□□□ 0.49
CCNA1-203ENST00000625767 AKAP5P24588 427 aa18.09■□□□□ 0.49
CCNA1-203ENST00000625767 SNRNP35Q16560 246 aaKnown RBP18.09■□□□□ 0.49
CCNA1-203ENST00000625767 CDKAL1Q5VV42 579 aa18.09■□□□□ 0.49
CCNA1-203ENST00000625767 FOXR2Q6PJQ5 311 aa18.09■□□□□ 0.49
CCNA1-203ENST00000625767 CREBRFQ8IUR6 639 aa18.09■□□□□ 0.49
CCNA1-203ENST00000625767 TMEM199Q8N511 208 aa18.09■□□□□ 0.49
CCNA1-203ENST00000625767 TMEM174Q8WUU8 243 aa18.09■□□□□ 0.49
CCNA1-203ENST00000625767 CNOT6LQ96LI5 555 aaKnown RBP18.09■□□□□ 0.49
CCNA1-203ENST00000625767 FBXL18Q96ME1 805 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms