RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PDXKO00764 312 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 MSH4O15457 936 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 HNRNPRO43390 633 aaKnown RBP13.34□□□□□ -0.27
LITAF-221ENST00000622633 ATP9BO43861 1147 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 PCK1P35558 622 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 TNNC1P63316 161 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 C10orf76Q5T2E6 689 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 SEPT14Q6ZU15 432 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 CEP128Q6ZU80 1094 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 LONP2Q86WA8 852 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 FBXO11Q86XK2 927 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 AP1M1Q9BXS5 423 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 UBAP1Q9NZ09 502 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 TMEM59LQ9UK28 342 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 FRMD4BQ9Y2L6 1034 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 SH3GLB1Q9Y371 365 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 LY75O60449 1722 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 BTNL10A8MVZ5 291 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 HMGB1P1B2RPK0 211 aaPredicted RBP13.34□□□□□ -0.27
LITAF-221ENST00000622633 EML1O00423 815 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 GDF11O95390 407 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 BCRP11274 1271 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 GNAZP19086 355 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 VARSP26640 1264 aaKnown RBP13.34□□□□□ -0.27
LITAF-221ENST00000622633 PPARDQ03181 441 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 SH3BP5LQ7L8J4 393 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 LRRC57Q8N9N7 239 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 NCSTNQ92542 709 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 SIX2Q9NPC8 291 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 ITM2BQ9Y287 266 aa13.34□□□□□ -0.27
LITAF-221ENST00000622633 ASTN1O14525 1302 aa13.33□□□□□ -0.27
LITAF-221ENST00000622633 IDO1P14902 403 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 HPDP32754 393 aaPredicted RBP13.33□□□□□ -0.28
LITAF-221ENST00000622633 ERVK-9P63128 1117 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 HLTFQ14527 1009 aaKnown RBP eCLIP13.33□□□□□ -0.28
LITAF-221ENST00000622633 MEX3CQ5U5Q3 659 aaKnown RBP13.33□□□□□ -0.28
LITAF-221ENST00000622633 DUS1LQ6P1R4 473 aaKnown RBP13.33□□□□□ -0.28
LITAF-221ENST00000622633 TPCN2Q8NHX9 752 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 EIF2AK1Q9BQI3 630 aaKnown RBP13.33□□□□□ -0.28
LITAF-221ENST00000622633 VCX3BQ9H321 246 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 VCX3AQ9NNX9 186 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 TYW1Q9NV66 732 aaKnown RBP13.33□□□□□ -0.28
LITAF-221ENST00000622633 FAM198AQ9UFP1 575 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 C10orf71Q711Q0 1435 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 hCG_2014768A0A024R1R8 64 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 FAM170AA1A519 330 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 TRIM43BA6NCK2 446 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 TBX3O15119 743 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 NDUFB5O43674 189 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 TBCAO75347 108 aaKnown RBP13.33□□□□□ -0.28
LITAF-221ENST00000622633 DRD4P21917 467 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 ZNF76P36508 570 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 SREBF1P36956 1147 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 PUS10Q3MIT2 529 aaKnown RBP13.33□□□□□ -0.28
LITAF-221ENST00000622633 DDX42Q86XP3 938 aaKnown RBP eCLIP13.33□□□□□ -0.28
LITAF-221ENST00000622633 MREGQ8N565 214 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 METTL13Q8N6R0 699 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 PIGOQ8TEQ8 1089 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 SCFD2Q8WU76 684 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 SLC35C1Q96A29 364 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 DDX27Q96GQ7 796 aaKnown RBP13.33□□□□□ -0.28
LITAF-221ENST00000622633 PBKQ96KB5 322 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 GJD4Q96KN9 370 aaPredicted RBP13.33□□□□□ -0.28
LITAF-221ENST00000622633 FAM20AQ96MK3 541 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 MPHOSPH6Q99547 160 aaKnown RBP13.33□□□□□ -0.28
LITAF-221ENST00000622633 TAF1DQ9H5J8 278 aaPredicted RBP13.33□□□□□ -0.28
LITAF-221ENST00000622633 GCNT4Q9P109 453 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 HSFX1Q9UBD0 423 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 PI4KBQ9UBF8 816 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 VAV3Q9UKW4 847 aa13.33□□□□□ -0.28
LITAF-221ENST00000622633 ZMYND8Q9ULU4 1186 aaPredicted RBP13.33□□□□□ -0.28
LITAF-221ENST00000622633 MYH4Q9Y623 1939 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 PHF20L1A8MW92 1017 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 DDX3XO00571 662 aaKnown RBP eCLIP13.32□□□□□ -0.285e-10■■■■□ 22.1
LITAF-221ENST00000622633 NDUFB10O96000 172 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 SPATA31D3P0C874 917 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 TMOD1P28289 359 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 PRKCIP41743 596 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 GSTM4Q03013 218 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 CTTNQ14247 550 aaKnown RBP13.32□□□□□ -0.28
LITAF-221ENST00000622633 SYDE2Q5VT97 1194 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 SPATA31D4Q6ZUB0 917 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 U2AF1L4Q8WU68 220 aaKnown RBP13.32□□□□□ -0.28
LITAF-221ENST00000622633 RAPGEF5Q92565 580 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 RNF25Q96BH1 459 aaPredicted RBP13.32□□□□□ -0.28
LITAF-221ENST00000622633 ZDHHC15Q96MV8 337 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 VCXQ9H320 206 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 METTL14Q9HCE5 456 aaKnown RBP13.32□□□□□ -0.28
LITAF-221ENST00000622633 CROTQ9UKG9 612 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 RABGAP1Q9Y3P9 1069 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 ADAMTSL1Q8N6G6 1762 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 ZBTB39O15060 712 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 TGFB1I1O43294 461 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 H2AFZP0C0S5 128 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 MLH1P40692 756 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 JAM2P57087 298 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 JAG1P78504 1218 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 MCL1Q07820 350 aa13.32□□□□□ -0.28
LITAF-221ENST00000622633 H2AFVQ71UI9 128 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms