RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 COL9A1P20849 921 aa27.8■■■□□ 2.04
VEGFA-229ENST00000621747 GRIK3Q13003 919 aa27.8■■■□□ 2.04
VEGFA-229ENST00000621747 CUL4AQ13619 759 aa27.8■■■□□ 2.04
VEGFA-229ENST00000621747 PTPN14Q15678 1187 aa27.8■■■□□ 2.04
VEGFA-229ENST00000621747 ZRSR1Q15695 479 aaKnown RBP27.8■■■□□ 2.04
VEGFA-229ENST00000621747 BRAPQ7Z569 592 aa27.8■■■□□ 2.04
VEGFA-229ENST00000621747 DRC1Q96MC2 740 aa27.8■■■□□ 2.04
VEGFA-229ENST00000621747 KIFC3Q9BVG8 833 aa27.8■■■□□ 2.04
VEGFA-229ENST00000621747 EMILIN2Q9BXX0 1053 aa27.8■■■□□ 2.04
VEGFA-229ENST00000621747 NT5C3AQ9H0P0 336 aa27.8■■■□□ 2.04
VEGFA-229ENST00000621747 TTLL13PA6NNM8 815 aa27.79■■■□□ 2.04
VEGFA-229ENST00000621747 SOD2P04179 222 aa27.79■■■□□ 2.04
VEGFA-229ENST00000621747 HYIQ5T013 277 aa27.79■■■□□ 2.04
VEGFA-229ENST00000621747 PPFIBP1Q86W92 1011 aa27.79■■■□□ 2.04
VEGFA-229ENST00000621747 TIPINQ9BVW5 301 aa27.79■■■□□ 2.04
VEGFA-229ENST00000621747 COLEC11Q9BWP8 271 aa27.79■■■□□ 2.04
VEGFA-229ENST00000621747 MRPL17Q9NRX2 175 aaKnown RBP27.79■■■□□ 2.04
VEGFA-229ENST00000621747 DZANK1Q9NVP4 752 aa27.79■■■□□ 2.04
VEGFA-229ENST00000621747 MARCH5Q9NX47 278 aa27.79■■■□□ 2.04
VEGFA-229ENST00000621747 KLK14Q9P0G3 267 aa27.79■■■□□ 2.04
VEGFA-229ENST00000621747 CCDC169A6NNP5 214 aa27.78■■■□□ 2.04
VEGFA-229ENST00000621747 HIP1RO75146 1068 aa27.78■■■□□ 2.04
VEGFA-229ENST00000621747 BMP15O95972 392 aa27.78■■■□□ 2.04
VEGFA-229ENST00000621747 SSBP05455 408 aaKnown RBP eCLIP27.78■■■□□ 2.04
VEGFA-229ENST00000621747 DMP1Q13316 513 aaPredicted RBP27.78■■■□□ 2.04
VEGFA-229ENST00000621747 CBX2Q14781 532 aaPredicted RBP27.78■■■□□ 2.04
VEGFA-229ENST00000621747 RINT1Q6NUQ1 792 aa27.78■■■□□ 2.04
VEGFA-229ENST00000621747 GSTCDQ8NEC7 633 aa27.78■■■□□ 2.04
VEGFA-229ENST00000621747 CDK5RAP3Q96JB5 506 aa27.78■■■□□ 2.04
VEGFA-229ENST00000621747 LRFN3Q9BTN0 628 aa27.78■■■□□ 2.04
VEGFA-229ENST00000621747 HERC2P3Q9BVR0 1158 aa27.78■■■□□ 2.04
VEGFA-229ENST00000621747 APOL5Q9BWW9 433 aa27.78■■■□□ 2.04
VEGFA-229ENST00000621747 BACH2Q9BYV9 841 aa27.78■■■□□ 2.04
VEGFA-229ENST00000621747 SSX2IPQ9Y2D8 614 aa27.78■■■□□ 2.04
VEGFA-229ENST00000621747 PHLPP2Q6ZVD8 1323 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 LOC730098B7Z3J9 87 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 K7ERI5 159 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 URODP06132 367 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 PDCP20941 246 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 PEX3P56589 373 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 ITIH3Q06033 890 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 DCAF4L1Q3SXM0 396 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 CES5AQ6NT32 575 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 KCNK18Q7Z418 384 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 APBB1IPQ7Z5R6 666 aaPredicted RBP27.77■■■□□ 2.04
VEGFA-229ENST00000621747 AK8Q96MA6 479 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 RUSC1Q9BVN2 902 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 SNTG2Q9NY99 539 aa27.77■■■□□ 2.04
VEGFA-229ENST00000621747 EDN1P05305 212 aa27.76■■■□□ 2.03
VEGFA-229ENST00000621747 NPTX2P47972 431 aa27.76■■■□□ 2.03
VEGFA-229ENST00000621747 ATF7IP2Q5U623 682 aa27.76■■■□□ 2.03
VEGFA-229ENST00000621747 C1orf186Q6ZWK4 172 aa27.76■■■□□ 2.03
VEGFA-229ENST00000621747 RNF135Q8IUD6 432 aa27.76■■■□□ 2.03
VEGFA-229ENST00000621747 DAW1Q8N136 415 aa27.76■■■□□ 2.03
VEGFA-229ENST00000621747 ADAM7Q9H2U9 754 aa27.76■■■□□ 2.03
VEGFA-229ENST00000621747 C17orf75Q9HAS0 396 aa27.76■■■□□ 2.03
VEGFA-229ENST00000621747 C11orf16Q9NQ32 467 aa27.76■■■□□ 2.03
VEGFA-229ENST00000621747 USP20Q9Y2K6 914 aa27.76■■■□□ 2.03
VEGFA-229ENST00000621747 VPS37CA5D8V6 355 aaPredicted RBP27.75■■■□□ 2.03
VEGFA-229ENST00000621747 FAM86C2PA6NEL3 165 aa27.75■■■□□ 2.03
VEGFA-229ENST00000621747 SLC26A4O43511 780 aa27.75■■■□□ 2.03
VEGFA-229ENST00000621747 GUCY2CP25092 1073 aa27.75■■■□□ 2.03
VEGFA-229ENST00000621747 KLRC2P26717 231 aa27.75■■■□□ 2.03
VEGFA-229ENST00000621747 SLC22A17Q8WUG5 538 aa27.75■■■□□ 2.03
VEGFA-229ENST00000621747 RPGRIP1Q96KN7 1286 aa27.75■■■□□ 2.03
VEGFA-229ENST00000621747 KLHL5Q96PQ7 755 aa27.75■■■□□ 2.03
VEGFA-229ENST00000621747 PNMA5Q96PV4 448 aa27.75■■■□□ 2.03
VEGFA-229ENST00000621747 KMT5AQ9NQR1 393 aa27.75■■■□□ 2.03
VEGFA-229ENST00000621747 RBM19Q9Y4C8 960 aaKnown RBP27.75■■■□□ 2.03
VEGFA-229ENST00000621747 LILRB3O75022 631 aa27.74■■■□□ 2.03
VEGFA-229ENST00000621747 RECQL4O94761 1208 aa27.74■■■□□ 2.03
VEGFA-229ENST00000621747 EPCAMP16422 314 aa27.74■■■□□ 2.03
VEGFA-229ENST00000621747 HERC4Q5GLZ8 1057 aaPredicted RBP27.74■■■□□ 2.03
VEGFA-229ENST00000621747 NT5DC1Q5TFE4 455 aa27.74■■■□□ 2.03
VEGFA-229ENST00000621747 EEF1DP3Q658K8 133 aa27.74■■■□□ 2.03
VEGFA-229ENST00000621747 CABP7Q86V35 215 aa27.74■■■□□ 2.03
VEGFA-229ENST00000621747 SYT2Q8N9I0 419 aaPredicted RBP27.74■■■□□ 2.03
VEGFA-229ENST00000621747 NECTIN4Q96NY8 510 aa27.74■■■□□ 2.03
VEGFA-229ENST00000621747 TMEM134Q9H6X4 195 aa27.74■■■□□ 2.03
VEGFA-229ENST00000621747 KCNG1Q9UIX4 513 aa27.74■■■□□ 2.03
VEGFA-229ENST00000621747 TDRD15B5MCY1 1934 aaKnown RBP27.74■■■□□ 2.03
VEGFA-229ENST00000621747 C5orf42Q9H799 3197 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 C2CD2LO14523 706 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 THP07101 528 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 CNPP09543 421 aaKnown RBP27.73■■■□□ 2.03
VEGFA-229ENST00000621747 GLUD2P49448 558 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 MAPK7Q13164 816 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 TUSC3Q13454 348 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 KIAA1841Q6NSI8 718 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 RNF168Q8IYW5 571 aaPredicted RBP27.73■■■□□ 2.03
VEGFA-229ENST00000621747 RIPOR3Q96MK2 946 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 PLIN2Q99541 437 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 KCND2Q9NZV8 630 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 ARHGAP28Q9P2N2 729 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 MUTYHQ9UIF7 546 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 TNFSF13BQ9Y275 285 aa27.73■■■□□ 2.03
VEGFA-229ENST00000621747 EFEMP2O95967 443 aa27.72■■■□□ 2.03
VEGFA-229ENST00000621747 UBA7P41226 1012 aa27.72■■■□□ 2.03
VEGFA-229ENST00000621747 MTHFRP42898 656 aa27.72■■■□□ 2.03
VEGFA-229ENST00000621747 TMEM119Q4V9L6 283 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms