RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 PDCD11Q14690 1871 aaKnown RBP15.7■□□□□ 0.1
CBWD3-217ENST00000621474 EPOPA6NHQ4 379 aa15.7■□□□□ 0.1
CBWD3-217ENST00000621474 TISP43B9A030 160 aa15.7■□□□□ 0.1
CBWD3-217ENST00000621474 PRPF40AO75400 957 aaKnown RBP15.7■□□□□ 0.1
CBWD3-217ENST00000621474 OFD1O75665 1012 aa15.7■□□□□ 0.1
CBWD3-217ENST00000621474 TOM1L1O75674 476 aa15.7■□□□□ 0.1
CBWD3-217ENST00000621474 GCNT3O95395 438 aa15.7■□□□□ 0.1
CBWD3-217ENST00000621474 HOXD13P35453 343 aa15.7■□□□□ 0.1
CBWD3-217ENST00000621474 UBE2HP62256 183 aa15.7■□□□□ 0.1
CBWD3-217ENST00000621474 EPM2AIP1Q7L775 607 aaPredicted RBP15.7■□□□□ 0.1
CBWD3-217ENST00000621474 GSTCDQ8NEC7 633 aa15.7■□□□□ 0.1
CBWD3-217ENST00000621474 TMEM117Q9H0C3 514 aa15.7■□□□□ 0.1
CBWD3-217ENST00000621474 CXCL16Q9H2A7 254 aa15.7■□□□□ 0.1
CBWD3-217ENST00000621474 ANK1P16157 1881 aa15.7■□□□□ 0.1
CBWD3-217ENST00000621474 ZMYM2Q9UBW7 1377 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 TBKBP1A7MCY6 615 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 MEFVO15553 781 aaPredicted RBP15.69■□□□□ 0.1
CBWD3-217ENST00000621474 FAM189A1O60320 539 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 AKAP5P24588 427 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 BTG3Q14201 252 aaPredicted RBP15.69■□□□□ 0.1
CBWD3-217ENST00000621474 ZNF568Q3ZCX4 644 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 KMT5BQ4FZB7 885 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 FAM26FQ5R3K3 315 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 MPZL3Q6UWV2 235 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 TMEM192Q8IY95 271 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 HVCN1Q96D96 273 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 ZFP42Q96MM3 310 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 TIGD1Q96MW7 591 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 ADPGKQ9BRR6 497 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 C17orf80Q9BSJ5 609 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 TRIM6Q9C030 488 aaPredicted RBP15.69■□□□□ 0.1
CBWD3-217ENST00000621474 SEMA6BQ9H3T3 888 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 CWH43Q9H720 699 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 RSAD1Q9HA92 442 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
CBWD3-217ENST00000621474 PLXNA4Q9HCM2 1894 aa15.69■□□□□ 0.1
CBWD3-217ENST00000621474 ANKRD63C9JTQ0 380 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 HNRNPDLO14979 420 aaKnown RBP15.68■□□□□ 0.1
CBWD3-217ENST00000621474 INPPL1O15357 1258 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 HOXA2O43364 376 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 B4GALT3O60512 393 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 PRPF6O94906 941 aaKnown RBP15.68■□□□□ 0.1
CBWD3-217ENST00000621474 MCL1Q07820 350 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 STK4Q13043 487 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 PNOCQ13519 176 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 POSTNQ15063 836 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 TMEM132AQ24JP5 1023 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 DCAF4L1Q3SXM0 396 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 L1TD1Q5T7N2 865 aaKnown RBP15.68■□□□□ 0.1
CBWD3-217ENST00000621474 ZNF697Q5TEC3 545 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 FIBCD1Q8N539 461 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 KIAA0895Q8NCT3 520 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 ERCC4Q92889 916 aaPredicted RBP15.68■□□□□ 0.1
CBWD3-217ENST00000621474 PGBD4Q96DM1 585 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 FAM161BQ96MY7 647 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 APOL6Q9BWW8 343 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 CERS4Q9HA82 394 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 LMBRD1Q9NUN5 540 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 TYW1Q9NV66 732 aaKnown RBP15.68■□□□□ 0.1
CBWD3-217ENST00000621474 SNTG2Q9NY99 539 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 ANKFY1Q9P2R3 1169 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 STYXL1Q9Y6J8 313 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 ARL5CA6NH57 179 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 RPN1P04843 607 aaKnown RBP15.68■□□□□ 0.1
CBWD3-217ENST00000621474 ITGA4P13612 1032 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 ADSSP30520 456 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 ABCD1P33897 745 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 MLH1P40692 756 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 ERVK-21P61565 698 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 GRIN2CQ14957 1233 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 ZBTB33Q86T24 672 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 SPATA20Q8TB22 786 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 SCFD1Q8WVM8 642 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 GAD1Q99259 594 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 SLC39A2Q9NP94 309 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 TBC1D13Q9NVG8 400 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 MIOSQ9NXC5 875 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 PLAGL2Q9UPG8 496 aa15.68■□□□□ 0.1
CBWD3-217ENST00000621474 PRUNE2Q8WUY3 3088 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 EIF3DO15371 548 aaKnown RBP eCLIP15.67■□□□□ 0.1
CBWD3-217ENST00000621474 RECQL4O94761 1208 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 RHOBTB3O94955 611 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 MCF2P10911 925 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 LIG4P49917 911 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 ALCAMQ13740 583 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 NOLC1Q14978 699 aaKnown RBP eCLIP15.67■□□□□ 0.1
CBWD3-217ENST00000621474 SEZ6Q53EL9 994 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 KANK3Q6NY19 840 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 GLB1LQ6UWU2 654 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 ABI1Q8IZP0 508 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 LRRC43Q8N309 656 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 ZNF507Q8TCN5 953 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 BICD1Q96G01 975 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 GUCD1Q96NT3 240 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 TGS1Q96RS0 853 aaKnown RBP15.67■□□□□ 0.1
CBWD3-217ENST00000621474 MTUS1Q9ULD2 1270 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 INPP5FQ9Y2H2 1132 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 GIT1Q9Y2X7 761 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 PCDHB13Q9Y5F0 798 aa15.67■□□□□ 0.1
CBWD3-217ENST00000621474 XIRP2A4UGR9 3374 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms