RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 NMD3Q96D46 503 aaKnown RBP10.47□□□□□ -0.73
COL4A6-210ENST00000621266 OTUD5Q96G74 571 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 CLMNQ96JQ2 1002 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 TRPM8Q7Z2W7 1104 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 RAET1EQ8TD07 263 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 ANAPC7Q9UJX3 599 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 ZNF185O15231 689 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 SLC9A1P19634 815 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 SIX5Q8N196 739 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 VPS39Q96JC1 886 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 SYBUQ9NX95 663 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 SCAF8Q9UPN6 1271 aaKnown RBP10.47□□□□□ -0.73
COL4A6-210ENST00000621266 ADCY10Q96PN6 1610 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 MAGEA13PA6NCF6 341 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 MYO1GB0I1T2 1018 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 FBXW4P57775 412 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 GRIN1Q05586 938 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 RUNX1T1Q06455 604 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 RSRC2Q7L4I2 434 aaKnown RBP10.47□□□□□ -0.73
COL4A6-210ENST00000621266 PHF21AQ96BD5 680 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 ERP27Q96DN0 273 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 ATXN7L3BQ96GX2 97 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 AGBL1Q96MI9 1066 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 ACCSQ96QU6 501 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 ZNF341Q9BYN7 854 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 WWP1Q9H0M0 922 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 USE1Q9NZ43 259 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-210ENST00000621266 SEPT9Q9UHD8 586 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-210ENST00000621266 DBR1Q9UK59 544 aaKnown RBP10.47□□□□□ -0.73
COL4A6-210ENST00000621266 SPATA31A6Q5VVP1 1343 aa10.47□□□□□ -0.73
COL4A6-210ENST00000621266 STRNO43815 780 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 RPS6KA4O75676 772 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 PAMP19021 973 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 KIF23Q02241 960 aaPredicted RBP10.46□□□□□ -0.73
COL4A6-210ENST00000621266 LRRC1Q9BTT6 524 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 TNS3Q68CZ2 1445 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 SMAPO00193 183 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 ZSCAN20P17040 1043 aaPredicted RBP10.46□□□□□ -0.73
COL4A6-210ENST00000621266 PAPOLAP51003 745 aaKnown RBP10.46□□□□□ -0.73
COL4A6-210ENST00000621266 GPS1Q13098 491 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 NKX1-1Q15270 411 aaPredicted RBP10.46□□□□□ -0.73
COL4A6-210ENST00000621266 SARM1Q6SZW1 724 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 MTRQ99707 1265 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 MED7O43513 233 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 SMARCA1P28370 1054 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 ZCWPW2Q504Y3 356 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 MFSD4BQ5TF39 518 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 CDH24Q86UP0 819 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 ABHD8Q96I13 439 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 UNC45AQ9H3U1 944 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 HPS4Q9NQG7 708 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 MARCOQ9UEW3 520 aaPredicted RBP10.46□□□□□ -0.73
COL4A6-210ENST00000621266 CPSF3Q9UKF6 684 aaKnown RBP10.46□□□□□ -0.73
COL4A6-210ENST00000621266 HEY1Q9Y5J3 304 aa10.46□□□□□ -0.73
COL4A6-210ENST00000621266 LRRC53A6NM62 1247 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 H0YCG3 227 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 CCNE1P24864 410 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 CAV1Q03135 178 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 NR5A1Q13285 461 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 SH3BP5LQ7L8J4 393 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 RHOT2Q8IXI1 618 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 COA7Q96BR5 231 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 WRNIP1Q96S55 665 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 RCOR1Q9UKL0 485 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 PCDHA4Q9UN74 947 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 SOX13Q9UN79 622 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 VHLP40337 213 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 DSG1Q02413 1049 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 PPP6R3Q5H9R7 873 aaPredicted RBP10.46□□□□□ -0.74
COL4A6-210ENST00000621266 OLFML1Q6UWY5 402 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 TTC30BQ8N4P2 665 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 EMILIN3Q9NT22 766 aa10.46□□□□□ -0.74
COL4A6-210ENST00000621266 TRIM49BA6NDI0 452 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 GOLGA8JA6NMD2 632 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 LARGE1O95461 756 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 GPATCH4Q5T3I0 446 aaKnown RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 CYB5D1Q6P9G0 228 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 IYDQ6PHW0 289 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 ANKMY2Q8IV38 441 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 WDR24Q96S15 920 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 SARS2Q9NP81 518 aaKnown RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 CASS4Q9NQ75 786 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 C20orf96Q9NUD7 363 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 PDP2Q9P2J9 529 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 A2ML1A8K2U0 1454 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 NCAPD2Q15021 1401 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 AP3B1O00203 1094 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 FOSP01100 380 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 IMPDH2P12268 514 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 ADD2P35612 726 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 TFAMQ00059 246 aaKnown RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 ATP1A4Q13733 1029 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 OR2W6PQ8NHA6 318 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 SNF8Q96H20 258 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 SMAD5Q99717 465 aaKnown RBP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.45□□□□□ -0.74
COL4A6-210ENST00000621266 PAX7P23759 505 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 LSP1P33241 339 aa10.45□□□□□ -0.74
COL4A6-210ENST00000621266 LONRF1Q17RB8 773 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms