RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 RBAK-RBAKDNI3L0D1 243 aa11.48□□□□□ -0.57
CDH1-214ENST00000621016 PPIP5K2O43314 1243 aa11.48□□□□□ -0.57
CDH1-214ENST00000621016 NPR1P16066 1061 aa11.48□□□□□ -0.57
CDH1-214ENST00000621016 GJC1P36383 396 aa11.48□□□□□ -0.57
CDH1-214ENST00000621016 BPIFB4P59827 614 aa11.48□□□□□ -0.57
CDH1-214ENST00000621016 MYL7Q01449 175 aa11.48□□□□□ -0.57
CDH1-214ENST00000621016 IFI16Q16666 785 aaKnown RBP11.48□□□□□ -0.57
CDH1-214ENST00000621016 MSL3Q8N5Y2 521 aaKnown RBP11.48□□□□□ -0.57
CDH1-214ENST00000621016 TMCO5AQ8N6Q1 288 aa11.48□□□□□ -0.57
CDH1-214ENST00000621016 DCAF4Q8WV16 495 aa11.48□□□□□ -0.57
CDH1-214ENST00000621016 ATP6V1G3Q96LB4 118 aa11.48□□□□□ -0.57
CDH1-214ENST00000621016 RPS6KC1Q96S38 1066 aa11.48□□□□□ -0.57
CDH1-214ENST00000621016 CBWD1Q9BRT8 395 aa11.48□□□□□ -0.57
CDH1-214ENST00000621016 UNC45AQ9H3U1 944 aa11.48□□□□□ -0.57
CDH1-214ENST00000621016 UTP11Q9Y3A2 253 aaKnown RBP11.48□□□□□ -0.57
CDH1-214ENST00000621016 EYA4O95677 639 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 SREBF1P36956 1147 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 IFNAR2P48551 515 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 NOVP48745 357 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 AP3B2Q13367 1082 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 BLMHQ13867 455 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 CCDC38Q502W7 563 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 OTOP1Q7RTM1 612 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 CPLX4Q7Z7G2 160 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 SLC30A5Q8TAD4 765 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 SYN2Q92777 582 aaPredicted RBP11.47□□□□□ -0.57
CDH1-214ENST00000621016 FAM118BQ9BPY3 351 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 TMEM39BQ9GZU3 492 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 SIX2Q9NPC8 291 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 NYAP2Q9P242 653 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 VAV3Q9UKW4 847 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 CHMP2BQ9UQN3 213 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 TRAF3IP3Q9Y228 551 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 IPO5O00410 1097 aaKnown RBP11.47□□□□□ -0.57
CDH1-214ENST00000621016 HIP1RO75146 1068 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 FTLP02792 175 aaPredicted RBP11.47□□□□□ -0.57
CDH1-214ENST00000621016 ETS2P15036 469 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 ADRA2BP18089 450 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 TRIP13Q15645 432 aaPredicted RBP11.47□□□□□ -0.57
CDH1-214ENST00000621016 TMEM154Q6P9G4 183 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 MTHFD1LQ6UB35 978 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 MAIP1Q8WWC4 291 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 ZDHHC15Q96MV8 337 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 INTS2Q9H0H0 1204 aaKnown RBP11.47□□□□□ -0.57
CDH1-214ENST00000621016 METTL14Q9HCE5 456 aaKnown RBP11.47□□□□□ -0.57
CDH1-214ENST00000621016 ERVK-5Q9HDB9 667 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 MLXIPLQ9NP71 852 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 EMSYQ7Z589 1322 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 MYH7BA7E2Y1 1941 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 F8VZ95 297 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 ALAS1P13196 640 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 SOX5P35711 763 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 GLE1Q53GS7 698 aaKnown RBP11.47□□□□□ -0.57
CDH1-214ENST00000621016 ZFYVE27Q5T4F4 411 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 PHLDB3Q6NSJ2 640 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 KRT35Q92764 455 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 CAVIN3Q969G5 261 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 C18orf8Q96DM3 657 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 FAM81BQ96LP2 452 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 FAM20AQ96MK3 541 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 NAP1L4Q99733 375 aaKnown RBP11.47□□□□□ -0.57
CDH1-214ENST00000621016 WDR11Q9BZH6 1224 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 AGPAT3Q9NRZ7 376 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 TMOD2Q9NZR1 351 aa11.47□□□□□ -0.57
CDH1-214ENST00000621016 MYH1P12882 1939 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 PITPNM2Q9BZ72 1349 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 LAMB2P55268 1798 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 COL22A1Q8NFW1 1626 aaPredicted RBP11.46□□□□□ -0.57
CDH1-214ENST00000621016 DLATP10515 647 aaKnown RBP11.46□□□□□ -0.57
CDH1-214ENST00000621016 EIF2AK2P19525 551 aaKnown RBP11.46□□□□□ -0.57
CDH1-214ENST00000621016 UAP1Q16222 522 aaPredicted RBP11.46□□□□□ -0.57
CDH1-214ENST00000621016 ANKRD20A2Q5SQ80 823 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 HYIQ5T013 277 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 UBAP2Q5T6F2 1119 aaKnown RBP11.46□□□□□ -0.57
CDH1-214ENST00000621016 ANKRD20A1Q5TYW2 823 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 ANKRD20A3Q5VUR7 823 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 DAB2IPQ5VWQ8 1189 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 PODNQ7Z5L7 613 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 TRIM50Q86XT4 487 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 LRRC57Q8N9N7 239 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 MGARPQ8TDB4 240 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 C17orf50Q8WW18 174 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 CLIP3Q96DZ5 547 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 RNF14Q9UBS8 474 aa11.46□□□□□ -0.57
CDH1-214ENST00000621016 FOXO6A8MYZ6 492 aa11.46□□□□□ -0.58
CDH1-214ENST00000621016 H0YIN7 160 aa11.46□□□□□ -0.58
CDH1-214ENST00000621016 SLC16A4O15374 487 aa11.46□□□□□ -0.58
CDH1-214ENST00000621016 HNRNPRO43390 633 aaKnown RBP11.46□□□□□ -0.58
CDH1-214ENST00000621016 FOSP01100 380 aaPredicted RBP11.46□□□□□ -0.58
CDH1-214ENST00000621016 HNRNPCP07910 306 aaKnown RBP eCLIP11.46□□□□□ -0.58
CDH1-214ENST00000621016 NT5C2P49902 561 aa11.46□□□□□ -0.58
CDH1-214ENST00000621016 NPEPPSP55786 919 aa11.46□□□□□ -0.58
CDH1-214ENST00000621016 KCNJ2P63252 427 aa11.46□□□□□ -0.58
CDH1-214ENST00000621016 OTUD6AQ7L8S5 288 aa11.46□□□□□ -0.58
CDH1-214ENST00000621016 NT5DC3Q86UY8 548 aa11.46□□□□□ -0.58
CDH1-214ENST00000621016 ALG3Q92685 438 aa11.46□□□□□ -0.58
CDH1-214ENST00000621016 GLT8D2Q9H1C3 349 aa11.46□□□□□ -0.58
CDH1-214ENST00000621016 EBF2Q9HAK2 575 aa11.46□□□□□ -0.58
CDH1-214ENST00000621016 SLC5A4Q9NY91 659 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms