RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 UQCRFS1P1P0C7P4 283 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 TFAP4Q01664 338 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 R3HDM1Q15032 1099 aaKnown RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 WDR93Q6P2C0 686 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 IFNEQ86WN2 208 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 SCAF8Q9UPN6 1271 aaKnown RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 NLRP1Q9C000 1473 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 ARHGEF35A5YM69 484 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 MYCLP12524 364 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 ITGA6P23229 1130 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 ARSEP51690 589 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 SLC34A1Q06495 639 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 TMTC4Q5T4D3 741 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 KBTBD2Q8IY47 623 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 POP1Q99575 1024 aaKnown RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 PRRG3Q9BZD7 231 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 FAM192AQ9GZU8 254 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 MPP3Q13368 585 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 C11orf74Q86VG3 221 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 EME1Q96AY2 570 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 BRIP1Q9BX63 1249 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 ZNF232Q9UNY5 417 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 CHKBQ9Y259 395 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 NEDD4P46934 1319 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 VAV1P15498 845 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 HIC1Q14526 733 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 TTC33Q6PID6 262 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 CCDC81Q6ZN84 652 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 GLYCTKQ8IVS8 523 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 WDR70Q9NW82 654 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 FNDC3AQ9Y2H6 1198 aaKnown RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 SSH2Q76I76 1423 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 TNNI1P19237 187 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 ZMYM1Q5SVZ6 1142 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 TTLL7Q6ZT98 887 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 RABL2BQ9UNT1 228 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 CFAP99D6REC4 459 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 GAS7O60861 476 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 USP12O75317 370 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 CHN2P52757 468 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 CEP78Q5JTW2 689 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 TAS2R42Q7RTR8 314 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 JAMLQ86YT9 394 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 IFNL3Q8IZI9 196 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 AFAP1L2Q8N4X5 818 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 FAXDC2Q96IV6 333 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 INTS13Q9NVM9 706 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 PNMA8BQ9ULN7 279 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 TAF12Q16514 161 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 RINT1Q6NUQ1 792 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 CPA5Q8WXQ8 436 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 GTPBP10A4D1E9 387 aaKnown RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 IQCA1LA6NCM1 817 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 ITGA8P53708 1063 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 AADACL2Q6P093 401 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 ILDR1Q86SU0 546 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 IL17REQ8NFR9 667 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 TRAPPC9Q96Q05 1148 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 KLC2Q9H0B6 622 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 RXFP1Q9HBX9 757 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 CYP39A1Q9NYL5 469 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 SNX5Q9Y5X3 404 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 BOLA2-SMG1P6H3BVE0 249 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 ZC3H11AO75152 810 aaKnown RBP eCLIP5.33□□□□□ -1.563e-6■■■■□ 19.8
VPS13D-214ENST00000620676 ZBTB11O95625 1053 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 FLT3P36888 993 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 SPATA5Q8NB90 893 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 SLC35G2Q8TBE7 412 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 CALML6Q8TD86 181 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 GLMNQ92990 594 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 ISCUQ9H1K1 167 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 ZNF287Q9HBT7 754 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 SEC31BQ9NQW1 1179 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 PTPREP23469 700 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 CEBPAP49715 358 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 ITKQ08881 620 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 IDI1Q13907 227 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 NRF1Q16656 503 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 RIOK1Q9BRS2 568 aaKnown RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 CALN1Q9BXU9 219 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 RAD23AP54725 363 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 C6orf52Q5T4I8 152 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 RSBN1Q5VWQ0 802 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 RNF148Q8N7C7 305 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 SEMA4AQ9H3S1 761 aa5.33□□□□□ -1.56
VPS13D-214ENST00000620676 DMAP1Q9NPF5 467 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-214ENST00000620676 CYP2D6P10635 497 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 PDAP1Q13442 181 aaKnown RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 ZNF618Q5T7W0 954 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 SENP7Q9BQF6 1050 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 MAGEB3O15480 346 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 EIF2AK2P19525 551 aaKnown RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 NR1D2Q14995 579 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 CENPUQ71F23 418 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 SLC7A5P1Q8MH63 180 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 ARHGEF11O15085 1522 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 ASAP2O43150 1006 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 CALB2P22676 271 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 POLD3Q15054 466 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms