RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 MMP10P09238 476 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 ESRRAP11474 423 aaPredicted RBP8.88□□□□□ -0.99
ALMS1-208ENST00000620466 RFC1P35251 1148 aaPredicted RBP8.88□□□□□ -0.99
ALMS1-208ENST00000620466 CORO7P57737 925 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 IZUMO3Q5VZ72 239 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 GPD1LQ8N335 351 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 TRIM4Q9C037 500 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 HSPBP1Q9NZL4 362 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 GGT7Q9UJ14 662 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 SLC8A2Q9UPR5 921 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 DLG5Q8TDM6 1919 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 FER1L4A9Z1Z3 1794 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 SPATA31A1Q5TZJ5 1347 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 CDK17Q00537 523 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 NR1H3Q13133 447 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 EZH2Q15910 746 aaKnown RBP8.88□□□□□ -0.99
ALMS1-208ENST00000620466 PTGISQ16647 500 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 CDO1Q16878 200 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 PODNQ7Z5L7 613 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 TTC17Q96AE7 1141 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 SEC16BQ96JE7 1060 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 POLR3FQ9H1D9 316 aaPredicted RBP8.88□□□□□ -0.99
ALMS1-208ENST00000620466 IP6K2Q9UHH9 426 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 KNDC1Q76NI1 1749 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 GOLGA8QA0A0J9YX86 632 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 GOLGA8OA6NCC3 632 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 GOLGA8NF8WBI6 632 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 SURF1Q15526 300 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 CDC42EP5Q6NZY7 148 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 MYLK4Q86YV6 388 aaPredicted RBP8.88□□□□□ -0.99
ALMS1-208ENST00000620466 SIX6OS1Q8N1H7 587 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 ELMOD1Q8N336 334 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 KCNV2Q8TDN2 545 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 TTC1Q99614 292 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 KIAA1586Q9HCI6 787 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 PLAGL2Q9UPG8 496 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 SUGT1Q9Y2Z0 365 aa8.88□□□□□ -0.99
ALMS1-208ENST00000620466 TBX3O15119 743 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ADRA2BP18089 450 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 LONRF1Q17RB8 773 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 SLC27A3Q5K4L6 730 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ELMSAN1Q6PJG2 1045 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 PDIK1LQ8N165 341 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 MTRQ99707 1265 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 Q9H521 79 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 RPF1Q9H9Y2 349 aaKnown RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 GABBR1Q9UBS5 961 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 DBR1Q9UK59 544 aaKnown RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 PEAK1Q9H792 1746 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 CALB1P05937 261 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 YWHABP31946 246 aaKnown RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 STX1BP61266 288 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 PSMC5P62195 406 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 GPS1Q13098 491 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 KDM7AQ6ZMT4 941 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 HAUS6Q7Z4H7 955 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 CATSPER3Q86XQ3 398 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ANKS1AQ92625 1134 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 CYFIP2Q96F07 1278 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 TCP11X1B4DZS4 312 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 STK25O00506 426 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 HSD17B3P37058 310 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 KRT76Q01546 638 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 BYSLQ13895 437 aaKnown RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 PACSIN1Q9BY11 444 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ATP5HO75947 161 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 SFNP31947 248 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 SEC24CP53992 1094 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ASPHQ12797 758 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ATG16L1Q676U5 607 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 RHOT1Q8IXI2 618 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ZBED8Q8IZ13 594 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 SPDYE1Q8NFV5 336 aaPredicted RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 TPCN2Q8NHX9 752 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 SLC30A5Q8TAD4 765 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ALKBH8Q96BT7 664 aaKnown RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 LACRTQ9GZZ8 138 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 SUCLA2Q9P2R7 463 aaPredicted RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 PRDM4Q9UKN5 801 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ANGPTL2Q9UKU9 493 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 FNDC3AQ9Y2H6 1198 aaKnown RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 A0A0U1RQJ8 604 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 CFAP73A6NFT4 308 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 EIF3DO15371 548 aaKnown RBP eCLIP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 C21orf2O43822 256 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ZBED1O96006 694 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 TMEM253P0C7T8 217 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 STMN1P16949 149 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 ARL4AP40617 200 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 PDIA2Q13087 525 aaKnown RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 RC3H1Q5TC82 1133 aaKnown RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 SWSAP1Q6NVH7 229 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 DSTYKQ6XUX3 929 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 JAMLQ86YT9 394 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 C7orf31Q8N865 590 aa8.87□□□□□ -0.99
ALMS1-208ENST00000620466 SYT2Q8N9I0 419 aaPredicted RBP8.87□□□□□ -0.99
ALMS1-208ENST00000620466 MCPH1Q8NEM0 835 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms