RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 IGSF9Q9P2J2 1179 aa24.47■■□□□ 1.51
SRRT-218ENST00000620394 KANSL3Q9P2N6 904 aa24.47■■□□□ 1.51
SRRT-218ENST00000620394 VPS13AQ96RL7 3174 aa24.46■■□□□ 1.51
SRRT-218ENST00000620394 CLCN4P51793 760 aa24.46■■□□□ 1.51
SRRT-218ENST00000620394 AFF1P51825 1210 aaKnown RBP24.46■■□□□ 1.51
SRRT-218ENST00000620394 SIX5Q8N196 739 aa24.46■■□□□ 1.51
SRRT-218ENST00000620394 DTWD2Q8NBA8 298 aa24.46■■□□□ 1.51
SRRT-218ENST00000620394 KCNK12Q9HB15 430 aa24.46■■□□□ 1.51
SRRT-218ENST00000620394 UBN1Q9NPG3 1134 aa24.46■■□□□ 1.51
SRRT-218ENST00000620394 IPPQ9Y573 584 aa24.46■■□□□ 1.51
SRRT-218ENST00000620394 DCHS1Q96JQ0 3298 aa24.45■■□□□ 1.51
SRRT-218ENST00000620394 ZMYM2Q9UBW7 1377 aa24.45■■□□□ 1.5
SRRT-218ENST00000620394 PI15O43692 258 aa24.45■■□□□ 1.5
SRRT-218ENST00000620394 DDHD2O94830 711 aa24.45■■□□□ 1.5
SRRT-218ENST00000620394 CENPBP07199 599 aaPredicted RBP24.45■■□□□ 1.5
SRRT-218ENST00000620394 OR52Z1P0C646 297 aa24.45■■□□□ 1.5
SRRT-218ENST00000620394 CATSPER3Q86XQ3 398 aa24.45■■□□□ 1.5
SRRT-218ENST00000620394 FEZF2Q8TBJ5 459 aa24.45■■□□□ 1.5
SRRT-218ENST00000620394 KLHL5Q96PQ7 755 aa24.45■■□□□ 1.5
SRRT-218ENST00000620394 POLR3CQ9BUI4 534 aaPredicted RBP24.45■■□□□ 1.5
SRRT-218ENST00000620394 EIF2AQ9BY44 585 aaKnown RBP24.45■■□□□ 1.5
SRRT-218ENST00000620394 GBP3Q9H0R5 595 aa24.45■■□□□ 1.5
SRRT-218ENST00000620394 CSRNP2Q9H175 543 aa24.45■■□□□ 1.5
SRRT-218ENST00000620394 POLR3FQ9H1D9 316 aaPredicted RBP24.45■■□□□ 1.5
SRRT-218ENST00000620394 INO80B-WBP1J3KQ70 363 aa24.44■■□□□ 1.5
SRRT-218ENST00000620394 USO1O60763 962 aaKnown RBP24.44■■□□□ 1.5
SRRT-218ENST00000620394 MED24O75448 989 aa24.44■■□□□ 1.5
SRRT-218ENST00000620394 KLRC2P26717 231 aa24.44■■□□□ 1.5
SRRT-218ENST00000620394 CNPP09543 421 aaKnown RBP24.43■■□□□ 1.5
SRRT-218ENST00000620394 ARF4P18085 180 aaPredicted RBP24.43■■□□□ 1.5
SRRT-218ENST00000620394 ATP2B1P20020 1258 aa24.43■■□□□ 1.5
SRRT-218ENST00000620394 TRAPPC10P48553 1259 aa24.43■■□□□ 1.5
SRRT-218ENST00000620394 RBM25P49756 843 aaKnown RBP24.43■■□□□ 1.5
SRRT-218ENST00000620394 CDCA2Q69YH5 1023 aaPredicted RBP24.43■■□□□ 1.5
SRRT-218ENST00000620394 ELMSAN1Q6PJG2 1045 aa24.43■■□□□ 1.5
SRRT-218ENST00000620394 NOSTRINQ8IVI9 506 aa24.43■■□□□ 1.5
SRRT-218ENST00000620394 MCPH1Q8NEM0 835 aa24.43■■□□□ 1.5
SRRT-218ENST00000620394 CMASQ8NFW8 434 aaPredicted RBP24.43■■□□□ 1.5
SRRT-218ENST00000620394 CPB2Q96IY4 423 aa24.43■■□□□ 1.5
SRRT-218ENST00000620394 SEMA4AQ9H3S1 761 aa24.43■■□□□ 1.5
SRRT-218ENST00000620394 MRPL17Q9NRX2 175 aaKnown RBP24.43■■□□□ 1.5
SRRT-218ENST00000620394 ITGA4P13612 1032 aa24.42■■□□□ 1.5
SRRT-218ENST00000620394 RPA1P27694 616 aa24.42■■□□□ 1.5
SRRT-218ENST00000620394 DSC1Q08554 894 aa24.42■■□□□ 1.5
SRRT-218ENST00000620394 NCBP1Q09161 790 aaKnown RBP24.42■■□□□ 1.5
SRRT-218ENST00000620394 TTC38Q5R3I4 469 aa24.42■■□□□ 1.5
SRRT-218ENST00000620394 PPP4R3CPQ6ZMV5 832 aa24.42■■□□□ 1.5
SRRT-218ENST00000620394 STAMQ92783 540 aa24.42■■□□□ 1.5
SRRT-218ENST00000620394 MARCH5Q9NX47 278 aa24.42■■□□□ 1.5
SRRT-218ENST00000620394 WNT16Q9UBV4 365 aa24.42■■□□□ 1.5
SRRT-218ENST00000620394 ARL5CA6NH57 179 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 EFEMP2O95967 443 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 POMCP01189 267 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 SSBP05455 408 aaKnown RBP eCLIP24.41■■□□□ 1.5
SRRT-218ENST00000620394 URODP06132 367 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 MUTP22033 750 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 POTEGQ6S5H5 508 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 COLGALT2Q8IYK4 626 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 ERMNQ8TAM6 284 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 NACC1Q96RE7 527 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 RHOBTB2Q9BYZ6 727 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 RNF39Q9H2S5 420 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 GPRC5CQ9NQ84 441 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 MAN1C1Q9NR34 630 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 DPP7Q9UHL4 492 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 CACNA1AO00555 2505 aa24.41■■□□□ 1.5
SRRT-218ENST00000620394 A0A087WWV3 80 aa24.4■■□□□ 1.5
SRRT-218ENST00000620394 B4GALT5O43286 388 aa24.4■■□□□ 1.5
SRRT-218ENST00000620394 RFX1P22670 979 aa24.4■■□□□ 1.5
SRRT-218ENST00000620394 MLH1P40692 756 aa24.4■■□□□ 1.5
SRRT-218ENST00000620394 ZNF174Q15697 407 aa24.4■■□□□ 1.5
SRRT-218ENST00000620394 CYP26C1Q6V0L0 522 aa24.4■■□□□ 1.5
SRRT-218ENST00000620394 RNF168Q8IYW5 571 aaPredicted RBP24.4■■□□□ 1.5
SRRT-218ENST00000620394 PRIMPOLQ96LW4 560 aa24.4■■□□□ 1.5
SRRT-218ENST00000620394 FAM193BQ96PV7 902 aaPredicted RBP24.4■■□□□ 1.5
SRRT-218ENST00000620394 GAD1Q99259 594 aa24.4■■□□□ 1.5
SRRT-218ENST00000620394 NXF3Q9H4D5 531 aaKnown RBP24.4■■□□□ 1.5
SRRT-218ENST00000620394 SSX2IPQ9Y2D8 614 aa24.4■■□□□ 1.5
SRRT-218ENST00000620394 GIT1Q9Y2X7 761 aa24.4■■□□□ 1.5
SRRT-218ENST00000620394 HES2Q9Y543 173 aa24.4■■□□□ 1.5
SRRT-218ENST00000620394 CLUHO75153 1309 aa24.39■■□□□ 1.5
SRRT-218ENST00000620394 A0A1B0GUA9 196 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 NRP1O14786 923 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 NARSO43776 548 aaKnown RBP24.39■■□□□ 1.49
SRRT-218ENST00000620394 LILRB3O75022 631 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 SOD2P04179 222 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 ALDH2P05091 517 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 ADH1AP07327 375 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 U2AF2P26368 475 aaKnown RBP eCLIP24.39■■□□□ 1.49
SRRT-218ENST00000620394 FXR2P51116 673 aaKnown RBP eCLIP24.39■■□□□ 1.49
SRRT-218ENST00000620394 FAM187BQ17R55 369 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 HAUS3Q68CZ6 603 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 SLC27A1Q6PCB7 646 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 HACE1Q8IYU2 909 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 C4orf32Q8N8J7 132 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 FAM184AQ8NB25 1140 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 WDR6Q9NNW5 1121 aaKnown RBP24.39■■□□□ 1.49
SRRT-218ENST00000620394 FAN1Q9Y2M0 1017 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 DOCK8Q8NF50 2099 aa24.39■■□□□ 1.49
SRRT-218ENST00000620394 LRRIQ4A6NIV6 560 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms