RNA–Protein interactions for RNA: ENST00000620232.1

SNORD3A-202, Transcript of small nucleolar RNA, C/D box 3A, humanhuman

Gene SNORD3A, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3A-202ENST00000620232 C1orf112Q9NSG2 853 aa12.04□□□□□ -0.48
SNORD3A-202ENST00000620232 HSPBP1Q9NZL4 362 aa12.04□□□□□ -0.48
SNORD3A-202ENST00000620232 TTC3P53804 2025 aa12.04□□□□□ -0.48
SNORD3A-202ENST00000620232 A0A0B4J269 797 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 TRIM49BA6NDI0 452 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 KIAA0355O15063 1070 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 CLIC2O15247 247 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 CBFA2T2O43439 604 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 EXTL3O43909 919 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 TIMP1P01033 207 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 IQCF3P0C7M6 154 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 ACTN1P12814 892 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 MTIF2P46199 727 aaKnown RBP12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 CYP2J2P51589 502 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 MCL1Q07820 350 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 KCNA1Q09470 495 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 IQCB1Q15051 598 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 TAS1R3Q7RTX0 852 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 FRMD5Q7Z6J6 570 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 UBE2Q1Q7Z7E8 422 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 FAM228AQ86W67 206 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 CREBRFQ8IUR6 639 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 CD302Q8IX05 232 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 PGBD4Q96DM1 585 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 PRDM5Q9NQX1 630 aaPredicted RBP12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 ARMCX3Q9UH62 379 aaPredicted RBP12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 TBX21Q9UL17 535 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 PADI3Q9ULW8 664 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 ST3GAL5Q9UNP4 418 aa12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 NOC2LQ9Y3T9 749 aaKnown RBP12.03□□□□□ -0.48
SNORD3A-202ENST00000620232 KCNJ18B7U540 433 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 XPOTO43592 962 aaKnown RBP12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 EVI5O60447 810 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 IL18RAPO95256 599 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 SERPINC1P01008 464 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 CLTAP09496 248 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 GHRP10912 638 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 PROZP22891 400 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 HOXD13P35453 343 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 AP3M2P53677 418 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 MARSP56192 900 aaKnown RBP12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 CETN1Q12798 172 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 KCNJ12Q14500 433 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 LPIN1Q14693 890 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 SNRNP35Q16560 246 aaKnown RBP12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 COL13A1Q5TAT6 717 aaPredicted RBP12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 LUZP1Q86V48 1076 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 DHX40Q8IX18 779 aaKnown RBP12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 ZC3H3Q8IXZ2 948 aaKnown RBP12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 FAM186BQ8IYM0 893 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 RNF214Q8ND24 703 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 WNT8BQ93098 351 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 FNBP1Q96RU3 617 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 TRAIPQ9BWF2 469 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 PPP1R12CQ9BZL4 782 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 PDZD7Q9H5P4 517 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 RPF1Q9H9Y2 349 aaKnown RBP12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 CDHR5Q9HBB8 845 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 ERVK-5Q9HDB9 667 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 UBN1Q9NPG3 1134 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 FANCLQ9NW38 375 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 DMAC2Q9NW81 257 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 NR2E3Q9Y5X4 410 aa12.02□□□□□ -0.49
SNORD3A-202ENST00000620232 ANKRD63C9JTQ0 380 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 N4BP1O75113 896 aaKnown RBP12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 HARSP12081 509 aaKnown RBP12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 CD52P31358 61 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 GRM5P41594 1212 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 MRE11P49959 708 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 PPIGQ13427 754 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 IKBKEQ14164 716 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 AMHR2Q16671 573 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 TCP11X2Q5H9J9 407 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 MFSD5Q6N075 450 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 CNKSR3Q6P9H4 555 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 ZBTB33Q86T24 672 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 NT5DC4Q86YG4 428 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 TMEM40Q8WWA1 233 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 CPB2Q96IY4 423 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 CNOT6LQ96LI5 555 aaKnown RBP12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 FBXL18Q96ME1 805 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 ACAP3Q96P50 834 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 DUSP9Q99956 384 aaKnown RBP12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 CDT1Q9H211 546 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 PCIF1Q9H4Z3 704 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 PLEKHA5Q9HAU0 1116 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 PTPRHQ9HD43 1115 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 R3HCC1Q9Y3T6 440 aaKnown RBP12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.01□□□□□ -0.49not detected■■■■■ 70.7
SNORD3A-202ENST00000620232 NLRC5Q86WI3 1866 aa12.01□□□□□ -0.49
SNORD3A-202ENST00000620232 B4GALT5O43286 388 aa12□□□□□ -0.49
SNORD3A-202ENST00000620232 HOXA2O43364 376 aa12□□□□□ -0.49
SNORD3A-202ENST00000620232 CSDE1O75534 798 aaKnown RBP12□□□□□ -0.49
SNORD3A-202ENST00000620232 NPTXRO95502 500 aa12□□□□□ -0.49
SNORD3A-202ENST00000620232 EOMESO95936 686 aa12□□□□□ -0.49
SNORD3A-202ENST00000620232 STAG3L1P0CL83 205 aa12□□□□□ -0.49
SNORD3A-202ENST00000620232 PMS1P54277 932 aaKnown RBP12□□□□□ -0.49
SNORD3A-202ENST00000620232 PLCB2Q00722 1185 aa12□□□□□ -0.49
SNORD3A-202ENST00000620232 BFSP1Q12934 665 aa12□□□□□ -0.49
SNORD3A-202ENST00000620232 MAN2A1Q16706 1144 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms