RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 PRIMPOLQ96LW4 560 aa17.27■□□□□ 0.36
LINC00221-202ENST00000619530 CDCA3Q99618 268 aaPredicted RBP17.27■□□□□ 0.36
LINC00221-202ENST00000619530 PDZD7Q9H5P4 517 aa17.27■□□□□ 0.36
LINC00221-202ENST00000619530 LMBRD1Q9NUN5 540 aa17.27■□□□□ 0.36
LINC00221-202ENST00000619530 GIT1Q9Y2X7 761 aa17.27■□□□□ 0.36
LINC00221-202ENST00000619530 ACKR2O00590 384 aa17.26■□□□□ 0.35
LINC00221-202ENST00000619530 N4BP3O15049 544 aa17.26■□□□□ 0.35
LINC00221-202ENST00000619530 SF3A1Q15459 793 aaKnown RBP17.26■□□□□ 0.35
LINC00221-202ENST00000619530 FAM187BQ17R55 369 aa17.26■□□□□ 0.35
LINC00221-202ENST00000619530 CABP7Q86V35 215 aa17.26■□□□□ 0.35
LINC00221-202ENST00000619530 TMEM175Q9BSA9 504 aa17.26■□□□□ 0.35
LINC00221-202ENST00000619530 CCDC113Q9H0I3 377 aa17.26■□□□□ 0.35
LINC00221-202ENST00000619530 PRG3Q9Y2Y8 225 aaPredicted RBP17.26■□□□□ 0.35
LINC00221-202ENST00000619530 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.25■□□□□ 0.35
LINC00221-202ENST00000619530 K7ERI5 159 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 CLASP2O75122 1294 aaKnown RBP17.25■□□□□ 0.35
LINC00221-202ENST00000619530 EDN1P05305 212 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 SRGAP2BP0DMP2 458 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 MRE11P49959 708 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 EFNA5P52803 228 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 COASYQ13057 564 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 DHX8Q14562 1220 aaKnown RBP17.25■□□□□ 0.35
LINC00221-202ENST00000619530 NT5DC1Q5TFE4 455 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 EEF1DP3Q658K8 133 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 C1orf186Q6ZWK4 172 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 COLGALT2Q8IYK4 626 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 RABGGTAQ92696 567 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 KHSRPQ92945 711 aaKnown RBP eCLIP17.25■□□□□ 0.35
LINC00221-202ENST00000619530 VN1R3Q9BXE9 311 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 EPHX3Q9H6B9 360 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 SNTG2Q9NY99 539 aa17.25■□□□□ 0.35
LINC00221-202ENST00000619530 NPHP3-ACAD11A0A0J9YXS1 232 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 CARNS1A5YM72 827 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 PLA2G4BP0C869 781 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 SYT1P21579 422 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 UBA7P41226 1012 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 NPTX2P47972 431 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 SMAD2Q15796 467 aaKnown RBP17.24■□□□□ 0.35
LINC00221-202ENST00000619530 FOXD4L5Q5VV16 416 aaPredicted RBP17.24■□□□□ 0.35
LINC00221-202ENST00000619530 FAM173BQ6P4H8 233 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 DAW1Q8N136 415 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 RASSF8Q8NHQ8 419 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 FOXD4L4Q8WXT5 416 aaPredicted RBP17.24■□□□□ 0.35
LINC00221-202ENST00000619530 DRC1Q96MC2 740 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 ADPGKQ9BRR6 497 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 NT5C3AQ9H0P0 336 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 ZBP1Q9H171 429 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 KMT5AQ9NQR1 393 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 CLIC4Q9Y696 253 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 F8W810 466 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 SLC16A4O15374 487 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 NR1I2O75469 434 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 CTSAP10619 480 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 CEBPZQ03701 1054 aaKnown RBP17.24■□□□□ 0.35
LINC00221-202ENST00000619530 GRIN1Q05586 938 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 ZP2Q05996 745 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 DMP1Q13316 513 aaPredicted RBP17.24■□□□□ 0.35
LINC00221-202ENST00000619530 ANKRD54Q6NXT1 300 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 ADHFE1Q8IWW8 467 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 SYT2Q8N9I0 419 aaPredicted RBP17.24■□□□□ 0.35
LINC00221-202ENST00000619530 CALML4Q96GE6 196 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 RPS6KC1Q96S38 1066 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 COLEC11Q9BWP8 271 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 PRKAG3Q9UGI9 489 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 GDAQ9Y2T3 454 aa17.24■□□□□ 0.35
LINC00221-202ENST00000619530 USP15Q9Y4E8 981 aaPredicted RBP17.24■□□□□ 0.35
LINC00221-202ENST00000619530 TDRD15B5MCY1 1934 aaKnown RBP17.23■□□□□ 0.35
LINC00221-202ENST00000619530 MUC3AQ02505 3323 aa17.23■□□□□ 0.35
LINC00221-202ENST00000619530 C2CD2LO14523 706 aa17.23■□□□□ 0.35
LINC00221-202ENST00000619530 INPPL1O15357 1258 aa17.23■□□□□ 0.35
LINC00221-202ENST00000619530 BMP15O95972 392 aa17.23■□□□□ 0.35
LINC00221-202ENST00000619530 CACNB1Q02641 598 aaPredicted RBP17.23■□□□□ 0.35
LINC00221-202ENST00000619530 HYIQ5T013 277 aa17.23■□□□□ 0.35
LINC00221-202ENST00000619530 ATF7IP2Q5U623 682 aa17.23■□□□□ 0.35
LINC00221-202ENST00000619530 TAS1R1Q7RTX1 841 aa17.23■□□□□ 0.35
LINC00221-202ENST00000619530 SMRP1Q8NCR6 262 aa17.23■□□□□ 0.35
LINC00221-202ENST00000619530 GSTCDQ8NEC7 633 aa17.23■□□□□ 0.35
LINC00221-202ENST00000619530 AK8Q96MA6 479 aa17.23■□□□□ 0.35
LINC00221-202ENST00000619530 MARCH5Q9NX47 278 aa17.23■□□□□ 0.35
LINC00221-202ENST00000619530 CACNG4Q9UBN1 327 aa17.23■□□□□ 0.35
LINC00221-202ENST00000619530 PRPF40AO75400 957 aaKnown RBP17.22■□□□□ 0.35
LINC00221-202ENST00000619530 MARCKSP29966 332 aaPredicted RBP17.22■□□□□ 0.35
LINC00221-202ENST00000619530 SLC12A3P55017 1021 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 DSC1Q08554 894 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 RESTQ13127 1097 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 MAPK7Q13164 816 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 KCNC3Q14003 757 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 TMEM119Q4V9L6 283 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 SPECC1Q5M775 1068 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 TMEM184AQ6ZMB5 413 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 ZBTB33Q86T24 672 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 CASP10Q92851 521 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 CXCL16Q9H2A7 254 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 GRPEL1Q9HAV7 217 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 HCFC2Q9Y5Z7 792 aa17.22■□□□□ 0.35
LINC00221-202ENST00000619530 RECQL4O94761 1208 aa17.21■□□□□ 0.35
LINC00221-202ENST00000619530 MBD3O95983 291 aa17.21■□□□□ 0.35
LINC00221-202ENST00000619530 GUCY2CP25092 1073 aa17.21■□□□□ 0.35
LINC00221-202ENST00000619530 LONP1P36776 959 aaKnown RBP17.21■□□□□ 0.35
LINC00221-202ENST00000619530 GRIK3Q13003 919 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms