RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 PPP1R2P41236 205 aa24.79■■□□□ 1.56
CBWD3-213ENST00000618217 RAB27AP51159 221 aa24.79■■□□□ 1.56
CBWD3-213ENST00000618217 DEFB103AP81534 67 aa24.79■■□□□ 1.56
CBWD3-213ENST00000618217 SHHQ15465 462 aa24.79■■□□□ 1.56
CBWD3-213ENST00000618217 DCAF4L1Q3SXM0 396 aa24.79■■□□□ 1.56
CBWD3-213ENST00000618217 TMEM174Q8WUU8 243 aa24.79■■□□□ 1.56
CBWD3-213ENST00000618217 DHTKD1Q96HY7 919 aaPredicted RBP24.79■■□□□ 1.56
CBWD3-213ENST00000618217 CBWD1Q9BRT8 395 aa24.79■■□□□ 1.56
CBWD3-213ENST00000618217 UBE2OQ9C0C9 1292 aaKnown RBP24.79■■□□□ 1.56
CBWD3-213ENST00000618217 CGNQ9P2M7 1197 aaKnown RBP24.79■■□□□ 1.56
CBWD3-213ENST00000618217 IPPQ9Y573 584 aa24.79■■□□□ 1.56
CBWD3-213ENST00000618217 LETM1O95202 739 aaPredicted RBP24.78■■□□□ 1.56
CBWD3-213ENST00000618217 C12orf56Q8IXR9 622 aa24.78■■□□□ 1.56
CBWD3-213ENST00000618217 PRO3102Q9H379 93 aa24.78■■□□□ 1.56
CBWD3-213ENST00000618217 NXF3Q9H4D5 531 aaKnown RBP24.78■■□□□ 1.56
CBWD3-213ENST00000618217 ELAC1Q9H777 363 aaKnown RBP24.78■■□□□ 1.56
CBWD3-213ENST00000618217 HES2Q9Y543 173 aa24.78■■□□□ 1.56
CBWD3-213ENST00000618217 EOMESO95936 686 aa24.77■■□□□ 1.56
CBWD3-213ENST00000618217 SKIP12755 728 aa24.77■■□□□ 1.56
CBWD3-213ENST00000618217 PMS1P54277 932 aaKnown RBP24.77■■□□□ 1.56
CBWD3-213ENST00000618217 ZSCAN23Q3MJ62 389 aa24.77■■□□□ 1.56
CBWD3-213ENST00000618217 SASS6Q6UVJ0 657 aa24.77■■□□□ 1.56
CBWD3-213ENST00000618217 HS2ST1Q7LGA3 356 aa24.77■■□□□ 1.56
CBWD3-213ENST00000618217 POMGNT1Q8WZA1 660 aa24.77■■□□□ 1.56
CBWD3-213ENST00000618217 RNF39Q9H2S5 420 aa24.77■■□□□ 1.56
CBWD3-213ENST00000618217 PSMA7O14818 248 aa24.76■■□□□ 1.55
CBWD3-213ENST00000618217 STIM1Q13586 685 aa24.76■■□□□ 1.55
CBWD3-213ENST00000618217 APBB1IPQ7Z5R6 666 aaPredicted RBP24.76■■□□□ 1.55
CBWD3-213ENST00000618217 CEP120Q8N960 986 aa24.76■■□□□ 1.55
CBWD3-213ENST00000618217 ZSWIM2Q8NEG5 633 aa24.76■■□□□ 1.55
CBWD3-213ENST00000618217 GOLGA5Q8TBA6 731 aa24.76■■□□□ 1.55
CBWD3-213ENST00000618217 P2RX5Q93086 422 aa24.76■■□□□ 1.55
CBWD3-213ENST00000618217 TOP1MTQ969P6 601 aa24.76■■□□□ 1.55
CBWD3-213ENST00000618217 MED15Q96RN5 788 aa24.76■■□□□ 1.55
CBWD3-213ENST00000618217 FUCA2Q9BTY2 467 aa24.76■■□□□ 1.55
CBWD3-213ENST00000618217 MSTO1Q9BUK6 570 aa24.76■■□□□ 1.55
CBWD3-213ENST00000618217 TRIM6Q9C030 488 aaPredicted RBP24.76■■□□□ 1.55
CBWD3-213ENST00000618217 DMAC2Q9NW81 257 aa24.76■■□□□ 1.55
CBWD3-213ENST00000618217 TMEM161AQ9NX61 479 aa24.76■■□□□ 1.55
CBWD3-213ENST00000618217 SYCE3A1L190 88 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 MEIS3P2A8K0S8 358 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 CLIC2O15247 247 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 OGTO15294 1046 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 AMHP03971 560 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 CCNE1P24864 410 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 GRM5P41594 1212 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 NFIL3Q16649 462 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 ZBTB41Q5SVQ8 909 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 ANKRD40Q6AI12 368 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 SLC9A9Q8IVB4 645 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 AGO2Q9UKV8 859 aaKnown RBP24.75■■□□□ 1.55
CBWD3-213ENST00000618217 TRIP11Q15643 1979 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 ZBBXA8MT70 800 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 KCNJ6P48051 423 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 TYRO3Q06418 890 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 SEZ6Q53EL9 994 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 KLHL10Q6JEL2 608 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 ARMCX5Q6P1M9 558 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 FOXR2Q6PJQ5 311 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 CRELD2Q6UXH1 353 aaPredicted RBP24.75■■□□□ 1.55
CBWD3-213ENST00000618217 AGMOQ6ZNB7 445 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 NPAS4Q8IUM7 802 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 TMEM192Q8IY95 271 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 NELFBQ8WX92 580 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 LPPQ93052 612 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 PCIF1Q9H4Z3 704 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 RNF19AQ9NV58 838 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 SLC4A7Q9Y6M7 1214 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 CITO14578 2027 aa24.75■■□□□ 1.55
CBWD3-213ENST00000618217 HARSP12081 509 aaKnown RBP24.74■■□□□ 1.55
CBWD3-213ENST00000618217 MATR3P43243 847 aaKnown RBP eCLIP24.74■■□□□ 1.55
CBWD3-213ENST00000618217 EDRF1Q3B7T1 1238 aa24.74■■□□□ 1.55
CBWD3-213ENST00000618217 TTI2Q6NXR4 508 aa24.74■■□□□ 1.55
CBWD3-213ENST00000618217 THNSL1Q8IYQ7 743 aa24.74■■□□□ 1.55
CBWD3-213ENST00000618217 FBXL18Q96ME1 805 aa24.74■■□□□ 1.55
CBWD3-213ENST00000618217 MTIF3Q9H2K0 278 aaKnown RBP24.74■■□□□ 1.55
CBWD3-213ENST00000618217 ANO10Q9NW15 660 aa24.74■■□□□ 1.55
CBWD3-213ENST00000618217 HSPBP1Q9NZL4 362 aa24.74■■□□□ 1.55
CBWD3-213ENST00000618217 COL4A6Q14031 1691 aa24.73■■□□□ 1.55
CBWD3-213ENST00000618217 TRIM49BA6NDI0 452 aa24.73■■□□□ 1.55
CBWD3-213ENST00000618217 KIAA0391O15091 583 aaKnown RBP24.73■■□□□ 1.55
CBWD3-213ENST00000618217 MEFVO15553 781 aaPredicted RBP24.73■■□□□ 1.55
CBWD3-213ENST00000618217 CALUO43852 315 aaPredicted RBP24.73■■□□□ 1.55
CBWD3-213ENST00000618217 NR3C1P04150 777 aa24.73■■□□□ 1.55
CBWD3-213ENST00000618217 STAG3L1P0CL83 205 aa24.73■■□□□ 1.55
CBWD3-213ENST00000618217 PAK1Q13153 545 aa24.73■■□□□ 1.55
CBWD3-213ENST00000618217 MYBPC2Q14324 1141 aa24.73■■□□□ 1.55
CBWD3-213ENST00000618217 STX1AQ16623 288 aa24.73■■□□□ 1.55
CBWD3-213ENST00000618217 TMCO2Q7Z6W1 182 aaPredicted RBP24.73■■□□□ 1.55
CBWD3-213ENST00000618217 PHOSPHO2Q8TCD6 241 aa24.73■■□□□ 1.55
CBWD3-213ENST00000618217 SNTG2Q9NY99 539 aa24.73■■□□□ 1.55
CBWD3-213ENST00000618217 CTNND2Q9UQB3 1225 aa24.73■■□□□ 1.55
CBWD3-213ENST00000618217 PCDHB7Q9Y5E2 793 aa24.73■■□□□ 1.55
CBWD3-213ENST00000618217 LAMA2P24043 3122 aaKnown RBP24.73■■□□□ 1.55
CBWD3-213ENST00000618217 FNDC1Q4ZHG4 1894 aaPredicted RBP24.72■■□□□ 1.55
CBWD3-213ENST00000618217 AKAP5P24588 427 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 TNFSF9P41273 254 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 LRRC63Q05C16 580 aa24.72■■□□□ 1.55
CBWD3-213ENST00000618217 CT47A1Q5JQC4 288 aaPredicted RBP24.72■■□□□ 1.55
CBWD3-213ENST00000618217 ZC3H3Q8IXZ2 948 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms