RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, human

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-228	ENST00000617771	COL9A1	P20849	921 aa		27.8	■■■□□ 2.04
VEGFA-228	ENST00000617771	GRIK3	Q13003	919 aa		27.8	■■■□□ 2.04
VEGFA-228	ENST00000617771	CUL4A	Q13619	759 aa		27.8	■■■□□ 2.04
VEGFA-228	ENST00000617771	PTPN14	Q15678	1187 aa		27.8	■■■□□ 2.04
VEGFA-228	ENST00000617771	ZRSR1	Q15695	479 aa	Known RBP	27.8	■■■□□ 2.04
VEGFA-228	ENST00000617771	BRAP	Q7Z569	592 aa		27.8	■■■□□ 2.04
VEGFA-228	ENST00000617771	DRC1	Q96MC2	740 aa		27.8	■■■□□ 2.04
VEGFA-228	ENST00000617771	KIFC3	Q9BVG8	833 aa		27.8	■■■□□ 2.04
VEGFA-228	ENST00000617771	EMILIN2	Q9BXX0	1053 aa		27.8	■■■□□ 2.04
VEGFA-228	ENST00000617771	NT5C3A	Q9H0P0	336 aa		27.8	■■■□□ 2.04
VEGFA-228	ENST00000617771	TTLL13P	A6NNM8	815 aa		27.79	■■■□□ 2.04
VEGFA-228	ENST00000617771	SOD2	P04179	222 aa		27.79	■■■□□ 2.04
VEGFA-228	ENST00000617771	HYI	Q5T013	277 aa		27.79	■■■□□ 2.04
VEGFA-228	ENST00000617771	PPFIBP1	Q86W92	1011 aa		27.79	■■■□□ 2.04
VEGFA-228	ENST00000617771	TIPIN	Q9BVW5	301 aa		27.79	■■■□□ 2.04
VEGFA-228	ENST00000617771	COLEC11	Q9BWP8	271 aa		27.79	■■■□□ 2.04
VEGFA-228	ENST00000617771	MRPL17	Q9NRX2	175 aa	Known RBP	27.79	■■■□□ 2.04
VEGFA-228	ENST00000617771	DZANK1	Q9NVP4	752 aa		27.79	■■■□□ 2.04
VEGFA-228	ENST00000617771	MARCH5	Q9NX47	278 aa		27.79	■■■□□ 2.04
VEGFA-228	ENST00000617771	KLK14	Q9P0G3	267 aa		27.79	■■■□□ 2.04
VEGFA-228	ENST00000617771	CCDC169	A6NNP5	214 aa		27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	HIP1R	O75146	1068 aa		27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	BMP15	O95972	392 aa		27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	SSB	P05455	408 aa	Known RBP eCLIP	27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	DMP1	Q13316	513 aa	Predicted RBP	27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	CBX2	Q14781	532 aa	Predicted RBP	27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	RINT1	Q6NUQ1	792 aa		27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	GSTCD	Q8NEC7	633 aa		27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	CDK5RAP3	Q96JB5	506 aa		27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	LRFN3	Q9BTN0	628 aa		27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	HERC2P3	Q9BVR0	1158 aa		27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	APOL5	Q9BWW9	433 aa		27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	BACH2	Q9BYV9	841 aa		27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	SSX2IP	Q9Y2D8	614 aa		27.78	■■■□□ 2.04
VEGFA-228	ENST00000617771	PHLPP2	Q6ZVD8	1323 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	LOC730098	B7Z3J9	87 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771		K7ERI5	159 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	UROD	P06132	367 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	PDC	P20941	246 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	PEX3	P56589	373 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	ITIH3	Q06033	890 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	DCAF4L1	Q3SXM0	396 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	CES5A	Q6NT32	575 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	KCNK18	Q7Z418	384 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	AK8	Q96MA6	479 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	RUSC1	Q9BVN2	902 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	SNTG2	Q9NY99	539 aa		27.77	■■■□□ 2.04
VEGFA-228	ENST00000617771	EDN1	P05305	212 aa		27.76	■■■□□ 2.03
VEGFA-228	ENST00000617771	NPTX2	P47972	431 aa		27.76	■■■□□ 2.03
VEGFA-228	ENST00000617771	ATF7IP2	Q5U623	682 aa		27.76	■■■□□ 2.03
VEGFA-228	ENST00000617771	C1orf186	Q6ZWK4	172 aa		27.76	■■■□□ 2.03
VEGFA-228	ENST00000617771	RNF135	Q8IUD6	432 aa		27.76	■■■□□ 2.03
VEGFA-228	ENST00000617771	DAW1	Q8N136	415 aa		27.76	■■■□□ 2.03
VEGFA-228	ENST00000617771	ADAM7	Q9H2U9	754 aa		27.76	■■■□□ 2.03
VEGFA-228	ENST00000617771	C17orf75	Q9HAS0	396 aa		27.76	■■■□□ 2.03
VEGFA-228	ENST00000617771	C11orf16	Q9NQ32	467 aa		27.76	■■■□□ 2.03
VEGFA-228	ENST00000617771	USP20	Q9Y2K6	914 aa		27.76	■■■□□ 2.03
VEGFA-228	ENST00000617771	VPS37C	A5D8V6	355 aa	Predicted RBP	27.75	■■■□□ 2.03
VEGFA-228	ENST00000617771	FAM86C2P	A6NEL3	165 aa		27.75	■■■□□ 2.03
VEGFA-228	ENST00000617771	SLC26A4	O43511	780 aa		27.75	■■■□□ 2.03
VEGFA-228	ENST00000617771	GUCY2C	P25092	1073 aa		27.75	■■■□□ 2.03
VEGFA-228	ENST00000617771	KLRC2	P26717	231 aa		27.75	■■■□□ 2.03
VEGFA-228	ENST00000617771	SLC22A17	Q8WUG5	538 aa		27.75	■■■□□ 2.03
VEGFA-228	ENST00000617771	RPGRIP1	Q96KN7	1286 aa		27.75	■■■□□ 2.03
VEGFA-228	ENST00000617771	KLHL5	Q96PQ7	755 aa		27.75	■■■□□ 2.03
VEGFA-228	ENST00000617771	PNMA5	Q96PV4	448 aa		27.75	■■■□□ 2.03
VEGFA-228	ENST00000617771	KMT5A	Q9NQR1	393 aa		27.75	■■■□□ 2.03
VEGFA-228	ENST00000617771	RBM19	Q9Y4C8	960 aa	Known RBP	27.75	■■■□□ 2.03
VEGFA-228	ENST00000617771	LILRB3	O75022	631 aa		27.74	■■■□□ 2.03
VEGFA-228	ENST00000617771	RECQL4	O94761	1208 aa		27.74	■■■□□ 2.03
VEGFA-228	ENST00000617771	EPCAM	P16422	314 aa		27.74	■■■□□ 2.03
VEGFA-228	ENST00000617771	HERC4	Q5GLZ8	1057 aa	Predicted RBP	27.74	■■■□□ 2.03
VEGFA-228	ENST00000617771	NT5DC1	Q5TFE4	455 aa		27.74	■■■□□ 2.03
VEGFA-228	ENST00000617771	EEF1DP3	Q658K8	133 aa		27.74	■■■□□ 2.03
VEGFA-228	ENST00000617771	CABP7	Q86V35	215 aa		27.74	■■■□□ 2.03
VEGFA-228	ENST00000617771	SYT2	Q8N9I0	419 aa	Predicted RBP	27.74	■■■□□ 2.03
VEGFA-228	ENST00000617771	NECTIN4	Q96NY8	510 aa		27.74	■■■□□ 2.03
VEGFA-228	ENST00000617771	TMEM134	Q9H6X4	195 aa		27.74	■■■□□ 2.03
VEGFA-228	ENST00000617771	KCNG1	Q9UIX4	513 aa		27.74	■■■□□ 2.03
VEGFA-228	ENST00000617771	TDRD15	B5MCY1	1934 aa	Known RBP	27.74	■■■□□ 2.03
VEGFA-228	ENST00000617771	C5orf42	Q9H799	3197 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	C2CD2L	O14523	706 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	TH	P07101	528 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	CNP	P09543	421 aa	Known RBP	27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	GLUD2	P49448	558 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	MAPK7	Q13164	816 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	TUSC3	Q13454	348 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	KIAA1841	Q6NSI8	718 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	RNF168	Q8IYW5	571 aa	Predicted RBP	27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	RIPOR3	Q96MK2	946 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	PLIN2	Q99541	437 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	KCND2	Q9NZV8	630 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	ARHGAP28	Q9P2N2	729 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	MUTYH	Q9UIF7	546 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	TNFSF13B	Q9Y275	285 aa		27.73	■■■□□ 2.03
VEGFA-228	ENST00000617771	EFEMP2	O95967	443 aa		27.72	■■■□□ 2.03
VEGFA-228	ENST00000617771	UBA7	P41226	1012 aa		27.72	■■■□□ 2.03
VEGFA-228	ENST00000617771	MTHFR	P42898	656 aa		27.72	■■■□□ 2.03
VEGFA-228	ENST00000617771	TMEM119	Q4V9L6	283 aa		27.72	■■■□□ 2.03

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